G86132 (LOC106577062)


Basic Information

Item Value
gene id G86132
gene name LOC106577062
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76606682 ~ 76608354 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU94946
GTCAGAATGTAATCAGGTCTTTAAAGGTGAATTTGAAAAATACTCACTCTGCTTTCTCCAACTCAGACTCTTTGTCTTCTCCTTCTTTACTATCTCCTTCTCTGGCACCTTCAACTGTTGTTTCCCATTGGGCTCAGCAGGGGATTGTTGGCCAGTGGTTGTGTTGAACAGGTCAGTCAGACTGGCTGTTAAGTCATGAGTCATTAGTCTGTATtgacctccttctctcctcactcGCAGACCGAAAATGTCTGACAGGACATTGGTGTCACTGGAGGAAACTGTTGACTGGCCTATCCCCCTCAGCTCGTCCCGGGAGGACCTTGTGCTGTATCTCCTCTCCCTGTAACCCCCTGACCCCCCTGTAACCTCATCGAGTGTGGGGTCAAGGATGCCTCCAAAAAGGTCGAACACCCTTATCTTCTTGGCCCCCTCTATGAGTCCTCCACTTACaaaaacaatatacagtacatataagaAGAAGCGAACCACAGAACAGACAAAGTGGACCAGACCCATGATCATGGCCTGGAAGAAGGAAGCAAATACCATGACTAAATCTCTCAGAGTTGTCTTCTTAATATGCTTCTTCAGGTCTTTCACAGAGAGCATAGACATCAGCATTATCAAGCCATAGGGTAGAGCGAAGACGATGAGCCAAATTGTAGACATGGAGAAAAATCTCATTTTGGATCTTTCCAACTCCTCCTCGTCATTCTTCCCCCTGTctttttcttcctcttcttcagcCTCTTTGCCTGCGGCCCTCTCCCCAGTGTCTGTCCCTGATATCTGGGCAGCCAGCTGCATCTCAAAGATGGTGTCTTCGCAGAAGTTGACAAACATCTCCATCTTCTCTTTCCCGTCGCCCTCATTGACCACGTCAAATATGAACTGTCTCTTGGACTCTTTGACCTGAGGCTTCTCCCACTGCGTGCGGCTGGACTCGCTGATCTCAAAGTAGACCCTCTCGATGCGCTTGCCACTGCCAAGGATCTCAATACGGCCCAGGTAGGGCTGGAAGTAGCTCAGAACACACTCTGCAAGCTGCAGAAAGGTACCAAGACGTGAATCGTAAGGCATGTGCTCAGACAGGTTGGTTAGGAGAACAGCAATGTTGAAGCCAATGTCTTTGGCTGGCTCGTGGAAGCGATCCACGAAGGCCTCATAATCCAGGAGCTCGTTTTCATCCGTCTCCGTGCAGGAGAGGAGGAACTGGGTCTCGGATTGAGAGTAGCGCTTGTAGGCCTCCATGGCCTTCTGGAAGTCCTTTTTGGAGATGCGACCTTCGCCGTCGTGATCATACTCTTTGAATGCGTCAGAGGATGTCAGGTCTTTGAGTTTGAGGAACATGTCGAAGAACTTTAGGATCATCTCAACATTGCTAGATGATTCCACCAACATGTCCACCATCTGCTTGCCAATTGTTCCATTTACCACATTA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94946 True 1444 TUCP 0.49 2 76606682 76608354

Neighbor

gene id symbol gene type direction distance location
LOC118964475 LOC106577059 coding downstream 139472 76465963 ~ 76467210 (-)
LOC110529591 fam149b1 coding downstream 154514 76444408 ~ 76452168 (-)
ccser2a ccser2 coding downstream 206685 76324531 ~ 76399997 (-)
vkorc1 LOC106577046 coding downstream 994286 75609347 ~ 75612396 (-)
LOC110529486 LOC106577095 coding downstream 1031736 75556145 ~ 75574946 (-)
LOC110529704 LOC106577064 coding upstream 255125 76863479 ~ 76871869 (-)
LOC110529688 LOC106577065 coding upstream 263738 76872092 ~ 76930446 (-)
LOC110529759 LOC106577068 coding upstream 439448 77045476 ~ 77084980 (-)
LOC110529788 LOC106577150 coding upstream 476520 77084874 ~ 77103340 (-)
LOC110529797 LOC106577148 coding upstream 496012 77104366 ~ 77118912 (-)
G86094 LOC106577062 non-coding downstream 31039 76562203 ~ 76575643 (-)
G86063 NA non-coding downstream 83201 76516251 ~ 76523481 (-)
G85960 NA non-coding downstream 131245 76474849 ~ 76475437 (-)
G85951 NA non-coding downstream 143790 76462582 ~ 76462892 (-)
G85950 NA non-coding downstream 144131 76462027 ~ 76462551 (-)
G86133 NA non-coding upstream 330 76608684 ~ 76609644 (-)
G86492 NA non-coding upstream 328287 76936641 ~ 76938757 (-)
G86783 NA non-coding upstream 413998 77022352 ~ 77022625 (-)
G86798 NA non-coding upstream 458044 77066398 ~ 77066950 (-)
G85866 NA other downstream 272546 76333468 ~ 76334136 (-)
G84713 NA other downstream 1077779 75528343 ~ 75528903 (-)
fank1 fank1 other downstream 1633361 74971772 ~ 74975108 (-)
G86448 NA other upstream 258550 76866904 ~ 76867598 (-)
G87090 NA other upstream 870249 77478603 ~ 77479939 (-)
G89418 NA other upstream 2441457 79049811 ~ 79050491 (-)
G90081 NA other upstream 2926404 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 3275183 79862081 ~ 79917875 (-)

Expression


Co-expression Network