G86492


Basic Information

Item Value
gene id G86492
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 76936641 ~ 76938757 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU95340
GGGGGTGGAGTCATAATTGGTCTGTTTTTTGTATGGGTCATCTCAGAAATAACTCAATAATAAGTTATATAACATTGGGAACGTCAAACAAAAGGAAAATAATGACTTCATAGCATAAAAGCAGTTAATTTGGGGATAGAAAGTGCTTCCCATATACAACACTTCTTCTTGAACCAGTGTGGATGAGGGGTGGCAACAGTACTGTTTTCAGAAGTGTCCATGAAGTTAATTTGCTTAAACCTCTTCCGTTGTCTCAAACTTCAGTCCTTTACATTGCATACTTTTGAGTCCAATCTCTTGCTAATCTGTTGTACTTTCTTTGTCCTGCTTGTAGATGTGTGCTATGTCTGGGACTAGGGGGTCATCTGGGTTTGGGTCACATAGCAAAGAGCATATGGACAATAAAACTGGAAGAACAAAAAGGCAGGGATAACCAGGATGAGTTTATTTCGCAATTACACCAGCAATAATAGTCATTATCAATATTGTCAAGCTTAACAGTTGGAGAACAAATCAGGCATTTTTCAACTAACTTTCATGAGGGTACAAAAGACACACAGAAAAACAAGTTGGTTTACAAACCACACATGTAAGCCAGTTTGTCTTACCTTTTGAAACTGTAAGTGCTGGGGACCACTGTGACCTCAGGATGTCCAGACAGATGCTACCATTACTGTTTATGTTTGGGTGATAGATTTTTGTTGTGAAGGCTACCTATGGAAAGAAAATACATGGAGAAAAAGAAAGTCAGGCATACATACTGCATGTGGTTTAGGGTACTCGACACCTAGGGGAATATTGTGTAACAGGAGCTGAAGAGGTGTTTCTAACCTTTGGTGGTTTGAAGGGATAGTCTGTTGGGAAGTGGATGGTGAGGAAGAACACTCCTCCCTGATATGGGCTGTCAGTCTAAAAGAGGGGTGAAAGGTTCCTTGTTAAAACAGTGCTGTGAACCGTAAAGTGACACCCAATACTCCATAGAATGTTAAAGCCCACAGTCAGCCTCCCTTTACTTGTCATTGTTTACAGTAACAGAAGTGTGATGGGGGTTTACTGGAGGTGACACACATCCAAGCAACTCTGTTATAGTAGGCTATATAGTAAGACAAGGAGACTAACACGTGTTCCTTTGGTGCAAGAAGGTTGAGCTTATAACAATGGGACCAAAGCAGAATAAATAGCTTCCATCAGAAATCAACACAATATTGACACACCGTTGTCTACTAAAGATTTAGAAACAATGAGAATTTAGAAAAGGGCTTACAGGTCCCATGATTGTGGCTTGCCAATGAAACACTGTAAAAGAAAGAAGAGACATTAGATCACATCAAATCATATAATTATAGAcaataataaaatacaaaatggcACCAAAAGGAATTAATCGACTGAGGTCAATACCCCTTCATTTCCATATGCATCAAATTGTATTTCTGCATTAATTAAGGTGGCCACAAAAGCTGTAGTGAAACATACAGTCCTCTCCAACTGGTCCAGCTGAGCATTGAGCAGGAGGGTCCCTTTGCAAGTCATGTAGCTCCtgtaaaataaaattaaatgtAGCACAATGAATTATGCACAGGGGGAAAATGCCATACATATAGTGCATTGTCTACCCAACAATGTTAGCTGCTTTGACAAGTCAGTCTTGTGGTCTATATGGCTTTATACGAATTCAAGTAGCTAGCTAGGTGACATGTTGTGCTGTATGTTTTACATGGTGTAATGTTTATTGACAGCTGCTGCTTTCTTGGCCAGATCTCCCTTGCAAAAGAGACGCCGTGTCTCAATGTttttttcctggttaaataagtAAACAACaaggtacctagctagctacatatatAACT

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95340 True 1850 lncRNA 0.39 2 76936641 76938757

Neighbor

gene id symbol gene type direction distance location
LOC110529688 LOC106577065 coding downstream 6195 76872092 ~ 76930446 (-)
LOC110529704 LOC106577064 coding downstream 64772 76863479 ~ 76871869 (-)
LOC118964475 LOC106577059 coding downstream 469431 76465963 ~ 76467210 (-)
LOC110529591 fam149b1 coding downstream 484473 76444408 ~ 76452168 (-)
ccser2a ccser2 coding downstream 536644 76324531 ~ 76399997 (-)
LOC110529759 LOC106577068 coding upstream 109045 77045476 ~ 77084980 (-)
LOC110529788 LOC106577150 coding upstream 146117 77084874 ~ 77103340 (-)
LOC110529797 LOC106577148 coding upstream 165609 77104366 ~ 77118912 (-)
LOC110529822 LOC106577147 coding upstream 190153 77128910 ~ 77142504 (-)
LOC110529831 LOC106577144 coding upstream 209614 77148371 ~ 77313800 (-)
G86133 NA non-coding downstream 326997 76608684 ~ 76609644 (-)
G86094 LOC106577062 non-coding downstream 360998 76562203 ~ 76575643 (-)
G86063 NA non-coding downstream 413160 76516251 ~ 76523481 (-)
G85960 NA non-coding downstream 461204 76474849 ~ 76475437 (-)
G85951 NA non-coding downstream 473749 76462582 ~ 76462892 (-)
G86783 NA non-coding upstream 83595 77022352 ~ 77022625 (-)
G86798 NA non-coding upstream 127641 77066398 ~ 77066950 (-)
G86802 NA non-coding upstream 133489 77072246 ~ 77072449 (-)
G86816 NA non-coding upstream 151527 77090284 ~ 77090615 (-)
G86448 NA other downstream 69043 76866904 ~ 76867598 (-)
G86132 LOC106577062 other downstream 328287 76606682 ~ 76608354 (-)
G85866 NA other downstream 602505 76333468 ~ 76334136 (-)
G87090 NA other upstream 539846 77478603 ~ 77479939 (-)
G89418 NA other upstream 2111054 79049811 ~ 79050491 (-)
G90081 NA other upstream 2596001 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 2944780 79862081 ~ 79917875 (-)
G90190 NA other upstream 2947918 79886675 ~ 79888180 (-)

Expression


Co-expression Network