XLOC_002032



Basic Information


Item Value
gene id XLOC_002032
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 17583381 ~ 17587877 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005861
AGCTGCCTGAAATCTCACTATCAGAGTCCGAGTCCGAGTCAGAAATGGCGGTGGACAGAGATGATCCCGATGGACGTTTGGTTTCCGGCGTCTCTGGAATGACACTGTCTGACTCTGTAACCGGGGGCTCCTCATGATCTGAGGATGATGCTGGTCCTTTCTTTCTCCTCATTGTTCACTCGACGCGTTAGAAAAACAGCTCAATCCACTTTCGCGCATAATGTCACGCATCTCAATCGATACACTGAGCCACATCTGACGCGTCGCTGCCCGAATCCACCATCTACAACCCGCTTTCAGCTGATTTGGGGACCATAAAAGCAGCTGACTATAACAAAGAGTTCACCGGCGAGCTAATAAATGATCGCTTTGTCAATAATCAGCCTCTAGTCGGTTTCGGCCGCCGCTAATGAACAGATAAACCTGGTTAACTCCGGCCATTAGTCTGCGTGACGTGTGTCTGAGATATTTCACCGCTTTTGTTGTTTGTACGGTATTTAATGAATGAAGACAGTTCTGATCAAACGCTAACCGGTTG

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005861 True 538 lncRNA 0.48 2 17583381 17587877

Neighbor


gene id symbol gene type direction distance location
XLOC_002031 NA coding upstream 85609 17459657 ~ 17497772 (+)
XLOC_002030 dre-mir-301c coding upstream 128809 17454490 ~ 17454572 (+)
XLOC_002029 dre-mir-130c-1 coding upstream 129878 17453363 ~ 17453503 (+)
XLOC_002028 NA coding upstream 134342 17442234 ~ 17449039 (+)
XLOC_002027 NA coding upstream 144897 17438158 ~ 17438484 (+)
XLOC_002033 kcnn2 coding downstream 4396 17592273 ~ 17674345 (+)
XLOC_002034 drg1 coding downstream 93197 17681074 ~ 17691171 (+)
XLOC_002035 dre-mir-218b coding downstream 107388 17695265 ~ 17695340 (+)
XLOC_002036 slc20a1b coding downstream 125145 17713022 ~ 17728165 (+)
XLOC_002037 pigo coding downstream 160003 17747880 ~ 17759878 (+)
XLOC_002040 BX927277.1 non-coding downstream 302212 17890089 ~ 17890203 (+)
XLOC_002042 NA non-coding downstream 419246 18007123 ~ 18071506 (+)
XLOC_002043 NA non-coding downstream 652673 18240550 ~ 18282435 (+)
XLOC_002045 AL928714.1 non-coding downstream 1211050 18798927 ~ 18802435 (+)

Expression



Co-expression Network