G86938


Basic Information

Item Value
gene id G86938
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77356467 ~ 77356784 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU95844
GCAAAACAGTGTACGAAGCCTACTCAGAAGACTAAATAAATGAACAACATCTTACCATTTATAATCTTTTCCCTTTCTTCTTTTCAAAGTTATTATCATTTCGACAACGAGAGGTAGAAAGAGGAATGTCATAAACCAGTAGATATTGTCATCTTTAACCAATGTCACTCTCCAAACTCCGATGAGTGAGATAAGAATGAAAAGCAACCTAGTAACTACCGCACACGAAAATTTGACCACAAACGCCATAATACTTAAGAGTAAAGATTCGACAGCTAGTGTCCCGTTATTCCTGAAACTCCCACACACAGCCACTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95844 True 318 lncRNA 0.38 1 77356467 77356784

Neighbor

gene id symbol gene type direction distance location
LOC100136692 cdc2 coding upstream 10924 77339654 ~ 77345543 (+)
LOC118965545 NA coding upstream 68773 77286989 ~ 77287694 (+)
LOC110529780 LOC106577069 coding upstream 308115 77027460 ~ 77048352 (+)
LOC110529720 NA coding upstream 341095 76943550 ~ 77015372 (+)
LOC110529711 LOC106607701 coding upstream 417603 76935475 ~ 76938864 (+)
LOC110529906 LOC106577140 coding downstream 25074 77381858 ~ 77451342 (+)
LOC110529921 LOC106577139 coding downstream 104096 77460880 ~ 77468921 (+)
LOC110529936 aedo coding downstream 125700 77482484 ~ 77484050 (+)
LOC110529943 LOC106577137 coding downstream 137261 77494045 ~ 77502290 (+)
LOC110532710 NA coding downstream 152774 77509558 ~ 77512353 (+)
G86937 LOC106577143 non-coding upstream 1596 77354484 ~ 77354871 (+)
G86559 NA non-coding upstream 202741 77150988 ~ 77153726 (+)
G86619 NA non-coding upstream 212502 77143733 ~ 77143965 (+)
G86593 NA non-coding upstream 257233 77098858 ~ 77099234 (+)
G86588 NA non-coding upstream 266229 77090020 ~ 77090238 (+)
G86939 NA non-coding downstream 466 77357250 ~ 77357637 (+)
G86949 NA non-coding downstream 14697 77371481 ~ 77371685 (+)
G86950 NA non-coding downstream 19787 77376571 ~ 77436269 (+)
G86971 rtkn2 non-coding downstream 97133 77453917 ~ 77455300 (+)
G86614 NA other upstream 232040 77123935 ~ 77124427 (+)
G86019 NA other upstream 720531 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 896644 76457821 ~ 76459823 (+)
G83979 NA other upstream 2210955 75144864 ~ 75145512 (+)
G83829 NA other upstream 2242277 75112660 ~ 75114190 (+)
G87159 NA other downstream 213231 77570015 ~ 77570470 (+)
G89667 NA other downstream 2192233 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2394989 79720751 ~ 79765359 (+)
G91064 NA other downstream 3408330 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 4181547 81538331 ~ 81541400 (+)

Expression


Co-expression Network