G87090


Basic Information

Item Value
gene id G87090
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77478603 ~ 77479939 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU96006
atctttacacaataccccataatgaaaaagtgaaaacacgtttttGGAAAAAACAAGAATaccttatttccataagtattcagaccctttgcaatgagactcaaaattgatctcaggtgcatcctgtttccattgatcatccttgatgtttctacaacttgattggaatccacctggggtaaattctattgattggacatgatttggaaaggcacacacctgtctatataaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgaaggaattgtccgtagagctccgaaacaggattgtgtcggggcccagatctggggaagggtaccaaaaaatgctgcagcattgaagatccctaagaacacagtgggttccatcattcttaaatggaagacgttaggaaccaccaagactcttcctagagctggccgcccagcaaaactgagcaatcgggggagaagggccttggtcagggaggtgaccaagaactccatggtcactgacagagctctagattcctctgtggagatgggaaaaccttccagaaggacaatcatctctgcaggaCTCCTCCAATCAGGcccttatggtagagtggccagacagaacccactccccagtaaaaggcacataacagcccagatagagtttgccaaaaggcacctaaagactctcagaccatgagaaacaacattatctggtctgatgaaaccaagattgaactctttggcctgaatgccaagcatcatgtctagaggaaacctgccgccatccctatggtgaagcattgtggtggcaacatcatgctgtggggatgtttttcagcggcagggactgggagactagtcaggatcgaggcaaagatgaatggagcaaagtacagagagatccttgatgaaaacctgctccagagcgctcaggacctcagactggggcgaaggttcaccttccaaaaggacaacaaccctaagcacacagccaagataacgcaggagtggcttcgggacaagtctctgaatgtccttgactggcccagctagagcccagacttgaaaccgatcaaacatctctggagagacctgaaaatagctgtgcagagaagaatgggattaactccccaaatacagatgtgccaagtttatagaatcatacccaaaaagactctatgctgtaatcgctgccaacggtgcttcaacaaagtactgagtaaagggtctgaataattatggaaacgtgatatttcattttaaaatattttctaaattagtaaaacatttctaaaaacctgtttttgtttgtcattatggggtattgtgtgta

Function

NR:

description
PREDICTED: zinc finger protein 271-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96006 True 1337 TUCP 0.45 1 77478603 77479939

Neighbor

gene id symbol gene type direction distance location
rtkn2a rtkn2 coding downstream 17943 77453710 ~ 77460660 (-)
tmem26a LOC106577143 coding downstream 121822 77352007 ~ 77356781 (-)
LOC110529831 LOC106577144 coding downstream 164803 77148371 ~ 77313800 (-)
LOC110529822 LOC106577147 coding downstream 336099 77128910 ~ 77142504 (-)
LOC110529797 LOC106577148 coding downstream 359691 77104366 ~ 77118912 (-)
LOC110529928 LOC106577138 coding upstream 4680 77484619 ~ 77487187 (-)
LOC110529949 LOC106577136 coding upstream 46492 77526431 ~ 77535457 (-)
LOC110529957 LOC106577135 coding upstream 55580 77535519 ~ 77542730 (-)
tbc1d12a LOC106577134 coding upstream 126980 77606919 ~ 77623628 (-)
LOC110529991 LOC106577131 coding upstream 215968 77695907 ~ 77735548 (-)
G87085 NA non-coding downstream 5236 77471489 ~ 77473367 (-)
G87081 NA non-coding downstream 17304 77461045 ~ 77461299 (-)
G87077 LOC106577140 non-coding downstream 27299 77447067 ~ 77451304 (-)
G87074 NA non-coding downstream 31978 77438836 ~ 77446625 (-)
G87018 NA non-coding downstream 123401 77354910 ~ 77355202 (-)
G87093 aedo non-coding upstream 2572 77482511 ~ 77483926 (-)
G87100 NA non-coding upstream 13197 77493136 ~ 77493369 (-)
G87111 NA non-coding upstream 33378 77513317 ~ 77513986 (-)
G87113 NA non-coding upstream 37506 77517445 ~ 77517657 (-)
G86448 NA other downstream 611005 76866904 ~ 76867598 (-)
G86132 LOC106577062 other downstream 870249 76606682 ~ 76608354 (-)
G86063 NA other downstream 955122 76516251 ~ 76523481 (-)
ccser2a ccser2 other downstream 1078647 76324531 ~ 76399997 (-)
G85866 NA other downstream 1144467 76333468 ~ 76334136 (-)
G89418 NA other upstream 1569872 79049811 ~ 79050491 (-)
G90081 NA other upstream 2054819 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 2403598 79862081 ~ 79917875 (-)
G90190 NA other upstream 2406736 79886675 ~ 79888180 (-)
G90382 NA other upstream 2661620 80141559 ~ 80142157 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_004733 CR932077.1 non-coding NC_007123.7 CM002896.2 25312018 ~ 25430371 (+)