G87093 (aedo)


Basic Information

Item Value
gene id G87093
gene name aedo
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77482511 ~ 77483926 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU96009
GCTGAGCAAATCATGGATTTTGACATTTTAAAGTGCTTGAACACCACCAATTAGCCATTTAGTTTTAATACACCTTTGTTTTTATTTTGAGTAATGTGAATGGTTTCAGTTCATTTCAAGACATGAAATGCTTATCAAAAATTCAAATACATTAGAGCTGATGTGCAAAGATCACAATTTATCAACTGCTTAAGTACTTTCATTACAGGCAGAATGCATAGTCCAACTTAGGATAAGTGCTTTTAGTTCACAAGACATGTTTTCCCATTACACAGCACTGTGACACATCCCATTCCATTGTAGGAATCATGGTCGTCATACATTTACATATTGTTTTGACATGGTCCTGAGAATCAATTGTTCACAAATCAATTCAGCGTTCATAGCTAGTGCGCTTCAGATCTTCACTTCAGGGCCGGGGTATGGTTCACCACCACACCAGAATTCAGAAGGTTGGGATACTTCCATCAGCCAAATTTCTTTTTGATCGTCAGCCTTTTTGTCCTCAGAATCCGGGGCAGACTGCAGAACTTTGTAATAATGACAGTCTCTCCCGTCGTCTGGATCATATGGGGGTGCCAAAATATCGAGGAAAGCGGTGGGCCCATCGACTGCATCAATTTGGTGAAGGTTGTTTCGGTCAGGGGTCAAGATACACGGCCCGCTTTCTTCTGTAAACTCCCCGACCGACCCGAGTATCGACCTCCTCAGCGCACCTCTCTGAAAAGGTAGCAGTGGAGGGCTGAATTGCGTGTCACTGGCCACGCTAGTTGATTTGTCCAACCTGTCAAAACAGGTGATCCTGACCTTGCCATACATAACTTTCAACATTCCGTACATTCCCGGGTGGTCGTGCAAGGGGATGGAAGCACCGCTTTTTAGCAGAAACACCCCCATGCTGAATTCGTCTGTCTCGCATATGTGCATGTATGTGACCGGGGGGTTGTGTGGCAAAGGCGTAGAAGCGCTGTCAACTTTCCTTGGAGCGATCTTCAGATCCGCAGCTCTGATTTCGGTCATGAGGCTTTGGAGTTTACATTGATTACCCAAAAACGCTTTATCACCAAATGAAGATGGGTTTCTAAAAGTTACAAGCGCCTGTCTAGCAATTTTCTGTACGATGGAGGTCATGTTGTCTCGAAGCATGATCGCTAACTAGCCCGTGAAGTCTCGCGCTTGCTAGCTTTAGCAGCAGGCTAGGGCTCCAAGCACAGCTGCCGATGattctgcctgcctctctctccttgaTAATGATTGATTAAACCCAGTGAAATATATATTCCAACTTcacattcaaataaaatataaataaagcaGAAGGTCTAATACAATTTTAAGTGAAGGGTACACTGCCTGGCACAACCGCAAATGTATCTCCCATCACACCATTCATGGATATCTTTCACACACGTCCGC

Function

NR:

description
2-aminoethanethiol dioxygenase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96009 True 1416 lncRNA 0.31 1 77482511 77483926

Neighbor

gene id symbol gene type direction distance location
rtkn2a rtkn2 coding downstream 21851 77453710 ~ 77460660 (-)
tmem26a LOC106577143 coding downstream 125730 77352007 ~ 77356781 (-)
LOC110529831 LOC106577144 coding downstream 168711 77148371 ~ 77313800 (-)
LOC110529822 LOC106577147 coding downstream 340007 77128910 ~ 77142504 (-)
LOC110529797 LOC106577148 coding downstream 363599 77104366 ~ 77118912 (-)
LOC110529928 LOC106577138 coding upstream 693 77484619 ~ 77487187 (-)
LOC110529949 LOC106577136 coding upstream 42505 77526431 ~ 77535457 (-)
LOC110529957 LOC106577135 coding upstream 51593 77535519 ~ 77542730 (-)
tbc1d12a LOC106577134 coding upstream 122993 77606919 ~ 77623628 (-)
LOC110529991 LOC106577131 coding upstream 211981 77695907 ~ 77735548 (-)
G87085 NA non-coding downstream 9144 77471489 ~ 77473367 (-)
G87081 NA non-coding downstream 21212 77461045 ~ 77461299 (-)
G87077 LOC106577140 non-coding downstream 31207 77447067 ~ 77451304 (-)
G87074 NA non-coding downstream 35886 77438836 ~ 77446625 (-)
G87018 NA non-coding downstream 127309 77354910 ~ 77355202 (-)
G87100 NA non-coding upstream 9210 77493136 ~ 77493369 (-)
G87111 NA non-coding upstream 29391 77513317 ~ 77513986 (-)
G87113 NA non-coding upstream 33519 77517445 ~ 77517657 (-)
G87140 NA non-coding upstream 61254 77545180 ~ 77545382 (-)
G87090 NA other downstream 2572 77478603 ~ 77479939 (-)
G86448 NA other downstream 614913 76866904 ~ 76867598 (-)
G86132 LOC106577062 other downstream 874157 76606682 ~ 76608354 (-)
G86063 NA other downstream 959030 76516251 ~ 76523481 (-)
ccser2a ccser2 other downstream 1082555 76324531 ~ 76399997 (-)
G89418 NA other upstream 1565885 79049811 ~ 79050491 (-)
G90081 NA other upstream 2050832 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 2399611 79862081 ~ 79917875 (-)
G90190 NA other upstream 2402749 79886675 ~ 79888180 (-)
G90382 NA other upstream 2657633 80141559 ~ 80142157 (-)

Expression


Co-expression Network