G87000


Basic Information

Item Value
gene id G87000
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77515523 ~ 77515771 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU95909
gtactttgttgatgcacctttggcagcgattacagccttgagtcttcttgggtatgacgctacaagcttggaacacctgtatttgtggagtttctcccattcttcttagcagatcctctcaagttctgtcaggttggatggggagcgtcgctacacagctattttcaggtctcttagataggggtcaagttcgggctctggctgggccactcaaggacattcagagacttgtcccgaagcccttcctgc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU95909 True 249 lncRNA 0.41 1 77515523 77515771

Neighbor

gene id symbol gene type direction distance location
LOC110532710 NA coding upstream 3170 77509558 ~ 77512353 (+)
LOC110529943 LOC106577137 coding upstream 13233 77494045 ~ 77502290 (+)
LOC110529936 aedo coding upstream 31473 77482484 ~ 77484050 (+)
LOC110529921 LOC106577139 coding upstream 46602 77460880 ~ 77468921 (+)
LOC110529906 LOC106577140 coding upstream 64181 77381858 ~ 77451342 (+)
LOC110522259 LOC106577152 coding downstream 120488 77636259 ~ 77637356 (+)
LOC110529971 LOC106577133 coding downstream 130168 77645939 ~ 77647927 (+)
LOC110529985 LOC106577132 coding downstream 146511 77662282 ~ 77664950 (+)
LOC110529992 LOC106577130 coding downstream 236814 77752585 ~ 77763628 (+)
LOC118964491 NA coding downstream 914424 78430195 ~ 78431114 (+)
G86997 NA non-coding upstream 1405 77513819 ~ 77514118 (+)
G86966 NA non-coding upstream 44776 77469998 ~ 77470747 (+)
G86978 NA non-coding upstream 53424 77461871 ~ 77462099 (+)
G86971 rtkn2 non-coding upstream 60223 77453917 ~ 77455300 (+)
G87127 LOC106577135 non-coding downstream 21626 77537397 ~ 77538423 (+)
G87128 LOC106577135 non-coding downstream 23535 77539306 ~ 77539746 (+)
G87156 NA non-coding downstream 49344 77565115 ~ 77565465 (+)
G87198 NA non-coding downstream 121804 77637575 ~ 77637825 (+)
G87208 NA non-coding downstream 134537 77650308 ~ 77650542 (+)
G86614 NA other upstream 391096 77123935 ~ 77124427 (+)
G86019 NA other upstream 879587 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1055700 76457821 ~ 76459823 (+)
G83979 NA other upstream 2370011 75144864 ~ 75145512 (+)
G83829 NA other upstream 2401333 75112660 ~ 75114190 (+)
G87159 NA other downstream 54244 77570015 ~ 77570470 (+)
G89667 NA other downstream 2033246 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 2236002 79720751 ~ 79765359 (+)
G91064 NA other downstream 3249343 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 4022560 81538331 ~ 81541400 (+)

Expression


Co-expression Network