G87484


Basic Information

Item Value
gene id G87484
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77842698 ~ 77843021 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU96424
taatgtaacaatgtggaaacaTTCaagggttcacacacacacacacacacacagaacgcatttgtttacatccaagtttgtgagcatttctcctttaccaagataatccacccacctgacaggtgtgcgatgtcaacaagctgattaaacagcatgatcattacacattacacaggggacaataaaaggccactctaaaatgtgcagttttgtcacacaacaccacagatgtctcaagttgagggagcgtgcaattggcatgctgaataatacagcaatgtccaccagagcggttgccagagaattgaatgttaatttgtcTAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96424 True 324 lncRNA 0.45 1 77842698 77843021

Neighbor

gene id symbol gene type direction distance location
LOC110529992 LOC106577130 coding upstream 79070 77752585 ~ 77763628 (+)
LOC110529985 LOC106577132 coding upstream 177748 77662282 ~ 77664950 (+)
LOC110529971 LOC106577133 coding upstream 194771 77645939 ~ 77647927 (+)
LOC110522259 LOC106577152 coding upstream 205342 77636259 ~ 77637356 (+)
LOC110532710 NA coding upstream 330345 77509558 ~ 77512353 (+)
LOC118964491 NA coding downstream 587174 78430195 ~ 78431114 (+)
LOC118964520 NA coding downstream 683671 78526692 ~ 78529763 (+)
LOC110530007 LOC106577126 coding downstream 698572 78541593 ~ 78625355 (+)
LOC110530018 LOC106577123 coding downstream 1152411 78995432 ~ 79054597 (+)
LOC110530025 rl19 coding downstream 1201565 79044586 ~ 79045036 (+)
G87483 NA non-coding upstream 1095 77841338 ~ 77841603 (+)
G87481 NA non-coding upstream 3756 77838718 ~ 77838942 (+)
G87470 NA non-coding upstream 14429 77827984 ~ 77828269 (+)
G87227 NA non-coding upstream 163407 77678904 ~ 77679291 (+)
G87224 NA non-coding upstream 165516 77676751 ~ 77677182 (+)
G87497 NA non-coding downstream 19158 77862179 ~ 77862708 (+)
G87516 NA non-coding downstream 46400 77889421 ~ 77889714 (+)
G87527 NA non-coding downstream 60806 77903827 ~ 77904071 (+)
G87567 NA non-coding downstream 128342 77971363 ~ 77972487 (+)
G88201 NA non-coding downstream 499575 78342596 ~ 78342867 (+)
G87159 NA other upstream 272228 77570015 ~ 77570470 (+)
G86614 NA other upstream 718271 77123935 ~ 77124427 (+)
G86019 NA other upstream 1206762 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1382875 76457821 ~ 76459823 (+)
G83979 NA other upstream 2697186 75144864 ~ 75145512 (+)
G89667 NA other downstream 1705996 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 1908752 79720751 ~ 79765359 (+)
G91064 NA other downstream 2922093 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 3695310 81538331 ~ 81541400 (+)
G91779 NA other downstream 4034518 81877539 ~ 81879178 (+)

Expression


Co-expression Network