G87516


Basic Information

Item Value
gene id G87516
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 77889421 ~ 77889714 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU96456
aataatcacagtagttgtcgagggtgcaacaagtcagcacctcaggagtaaatgtcagttggcttttcataactgatcattgagagtatctctaccgctcctgctgtctctagagagttgaaaacagcaggtctgggacaggtagcatgtccggtgaacaggtcagggttccatagccgcaggcagaacagttgaaactggagcaacagcacggccatgtggactggggacagcaaggtgtCATCATGCCGGGTAGTCCTGagtcatggtcctagggctcaggtcctccgagag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU96456 True 294 lncRNA 0.52 1 77889421 77889714

Neighbor

gene id symbol gene type direction distance location
LOC110529992 LOC106577130 coding upstream 125793 77752585 ~ 77763628 (+)
LOC110529985 LOC106577132 coding upstream 224471 77662282 ~ 77664950 (+)
LOC110529971 LOC106577133 coding upstream 241494 77645939 ~ 77647927 (+)
LOC110522259 LOC106577152 coding upstream 252065 77636259 ~ 77637356 (+)
LOC110532710 NA coding upstream 377068 77509558 ~ 77512353 (+)
LOC118964491 NA coding downstream 540481 78430195 ~ 78431114 (+)
LOC118964520 NA coding downstream 636978 78526692 ~ 78529763 (+)
LOC110530007 LOC106577126 coding downstream 651879 78541593 ~ 78625355 (+)
LOC110530018 LOC106577123 coding downstream 1105718 78995432 ~ 79054597 (+)
LOC110530025 rl19 coding downstream 1154872 79044586 ~ 79045036 (+)
G87497 NA non-coding upstream 26713 77862179 ~ 77862708 (+)
G87484 NA non-coding upstream 46400 77842698 ~ 77843021 (+)
G87483 NA non-coding upstream 47818 77841338 ~ 77841603 (+)
G87481 NA non-coding upstream 50479 77838718 ~ 77838942 (+)
G87470 NA non-coding upstream 61152 77827984 ~ 77828269 (+)
G87527 NA non-coding downstream 14113 77903827 ~ 77904071 (+)
G87567 NA non-coding downstream 81649 77971363 ~ 77972487 (+)
G88201 NA non-coding downstream 452882 78342596 ~ 78342867 (+)
G88240 NA non-coding downstream 479855 78369569 ~ 78369856 (+)
G88296 NA non-coding downstream 517144 78406858 ~ 78407204 (+)
G87159 NA other upstream 318951 77570015 ~ 77570470 (+)
G86614 NA other upstream 764994 77123935 ~ 77124427 (+)
G86019 NA other upstream 1253485 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1429598 76457821 ~ 76459823 (+)
G83979 NA other upstream 2743909 75144864 ~ 75145512 (+)
G89667 NA other downstream 1659303 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 1862059 79720751 ~ 79765359 (+)
G91064 NA other downstream 2875400 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 3648617 81538331 ~ 81541400 (+)
G91779 NA other downstream 3987825 81877539 ~ 81879178 (+)

Expression


Co-expression Network