G88201


Basic Information

Item Value
gene id G88201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 78342596 ~ 78342867 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU97166
gaatctaaaacaaaaatccagaaaatcacattgtatgattttaagtaattaatttgcttgtaggtgaccaaatacttattttccaccataatttgcaaataaattcattaaaaatcctacaatgtgattttctgaatttttacccctaattttgtctatcatagttgaagtgtacctatgatgaaaattacaggcctctctcatctttttaagtgggagaacatgcacaattggtggctgactaaatacttttttgccccactgtatatata

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97166 True 272 lncRNA 0.30 1 78342596 78342867

Neighbor

gene id symbol gene type direction distance location
LOC110529992 LOC106577130 coding upstream 578968 77752585 ~ 77763628 (+)
LOC110529985 LOC106577132 coding upstream 677646 77662282 ~ 77664950 (+)
LOC110529971 LOC106577133 coding upstream 694669 77645939 ~ 77647927 (+)
LOC110522259 LOC106577152 coding upstream 705240 77636259 ~ 77637356 (+)
LOC110532710 NA coding upstream 830243 77509558 ~ 77512353 (+)
LOC118964491 NA coding downstream 87328 78430195 ~ 78431114 (+)
LOC118964520 NA coding downstream 183825 78526692 ~ 78529763 (+)
LOC110530007 LOC106577126 coding downstream 198726 78541593 ~ 78625355 (+)
LOC110530018 LOC106577123 coding downstream 652565 78995432 ~ 79054597 (+)
LOC110530025 rl19 coding downstream 701719 79044586 ~ 79045036 (+)
G87567 NA non-coding upstream 370109 77971363 ~ 77972487 (+)
G87527 NA non-coding upstream 438525 77903827 ~ 77904071 (+)
G87516 NA non-coding upstream 452882 77889421 ~ 77889714 (+)
G87497 NA non-coding upstream 479888 77862179 ~ 77862708 (+)
G87484 NA non-coding upstream 499575 77842698 ~ 77843021 (+)
G88240 NA non-coding downstream 26702 78369569 ~ 78369856 (+)
G88296 NA non-coding downstream 63991 78406858 ~ 78407204 (+)
G88319 NA non-coding downstream 91026 78433893 ~ 78434792 (+)
G88446 NA non-coding downstream 175048 78517915 ~ 78518248 (+)
G88447 NA non-coding downstream 175454 78518321 ~ 78518746 (+)
G87159 NA other upstream 772126 77570015 ~ 77570470 (+)
G86614 NA other upstream 1218169 77123935 ~ 77124427 (+)
G86019 NA other upstream 1706660 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1882773 76457821 ~ 76459823 (+)
G83979 NA other upstream 3197084 75144864 ~ 75145512 (+)
G89667 NA other downstream 1206150 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 1408906 79720751 ~ 79765359 (+)
G91064 NA other downstream 2422247 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 3195464 81538331 ~ 81541400 (+)
G91779 NA other downstream 3534672 81877539 ~ 81879178 (+)

Expression


Co-expression Network