Gene
RNA
| Item | Value |
|---|---|
| gene id | G88212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 78349968 ~ 78350180 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU97177 | True | 213 | lncRNA | 0.50 | 1 | 78349968 | 78350180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529998 | LOC106577125 | coding | downstream | 40990 | 77924536 ~ 78308978 (-) |
| sh2d4ba | LOC106577151 | coding | downstream | 566997 | 77765944 ~ 77782971 (-) |
| LOC110529991 | LOC106577131 | coding | downstream | 614420 | 77695907 ~ 77735548 (-) |
| tbc1d12a | LOC106577134 | coding | downstream | 726340 | 77606919 ~ 77623628 (-) |
| LOC110529957 | LOC106577135 | coding | downstream | 807238 | 77535519 ~ 77542730 (-) |
| LOC110532724 | LOC106577124 | coding | upstream | 286104 | 78636284 ~ 78959395 (-) |
| LOC110530032 | ppp4r3b | coding | upstream | 730574 | 79080754 ~ 79092872 (-) |
| LOC110530078 | pnpt1 | coding | upstream | 742959 | 79093139 ~ 79109337 (-) |
| LOC110530099 | LOC106577117 | coding | upstream | 857322 | 79207502 ~ 79209199 (-) |
| LOC110530107 | rps27a | coding | upstream | 859684 | 79209864 ~ 79212568 (-) |
| G88204 | NA | non-coding | downstream | 4411 | 78345213 ~ 78345557 (-) |
| G88198 | NA | non-coding | downstream | 10617 | 78338959 ~ 78339351 (-) |
| G87908 | NA | non-coding | downstream | 377579 | 77971404 ~ 77972389 (-) |
| G87866 | NA | non-coding | downstream | 438527 | 77911198 ~ 77911441 (-) |
| G87865 | NA | non-coding | downstream | 438821 | 77910937 ~ 77911147 (-) |
| G88274 | NA | non-coding | upstream | 39402 | 78389582 ~ 78389789 (-) |
| G88279 | NA | non-coding | upstream | 41976 | 78392156 ~ 78392431 (-) |
| G88297 | NA | non-coding | upstream | 57403 | 78407583 ~ 78407808 (-) |
| G88437 | NA | non-coding | upstream | 158725 | 78508905 ~ 78509112 (-) |
| G88448 | NA | non-coding | upstream | 168139 | 78518319 ~ 78518636 (-) |
| G87090 | NA | other | downstream | 870029 | 77478603 ~ 77479939 (-) |
| G86448 | NA | other | downstream | 1482370 | 76866904 ~ 76867598 (-) |
| G86132 | LOC106577062 | other | downstream | 1741614 | 76606682 ~ 76608354 (-) |
| G86063 | NA | other | downstream | 1826487 | 76516251 ~ 76523481 (-) |
| ccser2a | ccser2 | other | downstream | 1950012 | 76324531 ~ 76399997 (-) |
| G89418 | NA | other | upstream | 699631 | 79049811 ~ 79050491 (-) |
| G90081 | NA | other | upstream | 1184578 | 79534758 ~ 79535572 (-) |
| LOC110530200 | NA | other | upstream | 1533357 | 79862081 ~ 79917875 (-) |
| G90190 | NA | other | upstream | 1536495 | 79886675 ~ 79888180 (-) |
| G90382 | NA | other | upstream | 1791379 | 80141559 ~ 80142157 (-) |
