G88319


Basic Information

Item Value
gene id G88319
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 78433893 ~ 78434792 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU97291
ccatagtgagGGGACAAAGGGATGTTGTCTGTGGCCtaagatttaccaggggcgtgagggatcataaaacccccacatcttcagacccctagatctctcctcctctgttggggttgagagatagggttgtggtctcctgtaacctgacctgatcaggacagtcatgacacttcACATCCTTGAGTCTGCAGAAGACCCCAACACCATTCTTCAGGCAAGACCATTCTTCAGCCCTGTTGTGATTGTCTGCGAAACCAAATGCATACTGGCTTTGGTACCATGCCTGTGGTGACCTTCCCAAAAGAGGACATCTATGCTAGCATAACATATCTCATGGTGTGTTATTACGCCTTTTCACCTCACATATCCTAAGTGCATTGTGACACTCCTCTCCGTGCTGCAGACAGAAGTCCTCTCAGACGCCATCCACGACCAGGACATGACTTCTTCATGTAAAAAGGCTATGGCCGAGTGGAAAAAGTTCATTACTGACTGGGGTTGCACGATACAATTCTTTCATTTCCGGTCCTGATAACAGAACTGTGTGTATCGGCCGATCTGATAACCTTTAATAAATAGGCAGGGCATTTGTTGTTTATTATATGAAGGTTTAAAGCACTGCTACGTTTGTTATCTTGCCATAGGTCTTACATTTTCACTTTCACCTTGACCACCAAtggtctttgttgttgtttttgcatCCTTTGTTCTGCCCATGTCAGCCTTTGGATATACTGAGTCCTCAATAAAGAAGTGAGAACGAATCTAATTTCTTTTTTCTTTCTATAAG

Function

NR:

description
uncharacterized protein LOC111564621

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97291 True 790 lncRNA 0.44 2 78433893 78434792

Neighbor

gene id symbol gene type direction distance location
LOC118964491 NA coding upstream 2779 78430195 ~ 78431114 (+)
LOC110529992 LOC106577130 coding upstream 670265 77752585 ~ 77763628 (+)
LOC110529985 LOC106577132 coding upstream 768943 77662282 ~ 77664950 (+)
LOC110529971 LOC106577133 coding upstream 785966 77645939 ~ 77647927 (+)
LOC110522259 LOC106577152 coding upstream 796537 77636259 ~ 77637356 (+)
LOC118964520 NA coding downstream 91900 78526692 ~ 78529763 (+)
LOC110530007 LOC106577126 coding downstream 106801 78541593 ~ 78625355 (+)
LOC110530018 LOC106577123 coding downstream 560640 78995432 ~ 79054597 (+)
LOC110530025 rl19 coding downstream 609794 79044586 ~ 79045036 (+)
cfap36 cfap36 coding downstream 622876 79057668 ~ 79080540 (+)
G88296 NA non-coding upstream 26689 78406858 ~ 78407204 (+)
G88240 NA non-coding upstream 64037 78369569 ~ 78369856 (+)
G88201 NA non-coding upstream 91026 78342596 ~ 78342867 (+)
G87567 NA non-coding upstream 461406 77971363 ~ 77972487 (+)
G87527 NA non-coding upstream 529822 77903827 ~ 77904071 (+)
G88446 NA non-coding downstream 83123 78517915 ~ 78518248 (+)
G88447 NA non-coding downstream 83529 78518321 ~ 78518746 (+)
G88467 NA non-coding downstream 96696 78531488 ~ 78531722 (+)
G88477 NA non-coding downstream 102852 78537644 ~ 78537873 (+)
G87159 NA other upstream 863423 77570015 ~ 77570470 (+)
G86614 NA other upstream 1309466 77123935 ~ 77124427 (+)
G86019 NA other upstream 1797957 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 1974070 76457821 ~ 76459823 (+)
G83979 NA other upstream 3288381 75144864 ~ 75145512 (+)
G89667 NA other downstream 1114225 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 1316981 79720751 ~ 79765359 (+)
G91064 NA other downstream 2330322 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 3103539 81538331 ~ 81541400 (+)
G91779 NA other downstream 3442747 81877539 ~ 81879178 (+)

Expression


Co-expression Network