G88446


Basic Information

Item Value
gene id G88446
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 78517915 ~ 78518248 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU97420
ctcttagaaaaaagggttccgaaAGGGAACTTCAGCTGTccatagcagaaccctttttggttccaggtagaacccgttttggttctaggtagaacccttttgggttacaCGTAGAACCCCTCTCTCTATGAAAAGAGTTCTACTTGGAACCCAAAAGgtttatacctggaaccaaaatggttctacatggaaccaaaaagggttattcaaagggttctcctatggagacagccgaAGAATAGTTTTAGGTTCtaaatagcacctttttttctaaaagTCTAGCGTTCACTtttgtgtttttgcagactttaccgtagtatttactgtagtatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU97420 True 334 lncRNA 0.40 1 78517915 78518248

Neighbor

gene id symbol gene type direction distance location
LOC118964491 NA coding upstream 86801 78430195 ~ 78431114 (+)
LOC110529992 LOC106577130 coding upstream 754287 77752585 ~ 77763628 (+)
LOC110529985 LOC106577132 coding upstream 852965 77662282 ~ 77664950 (+)
LOC110529971 LOC106577133 coding upstream 869988 77645939 ~ 77647927 (+)
LOC110522259 LOC106577152 coding upstream 880559 77636259 ~ 77637356 (+)
LOC118964520 NA coding downstream 8444 78526692 ~ 78529763 (+)
LOC110530007 LOC106577126 coding downstream 23345 78541593 ~ 78625355 (+)
LOC110530018 LOC106577123 coding downstream 477184 78995432 ~ 79054597 (+)
LOC110530025 rl19 coding downstream 526338 79044586 ~ 79045036 (+)
cfap36 cfap36 coding downstream 539420 79057668 ~ 79080540 (+)
G88319 NA non-coding upstream 83123 78433893 ~ 78434792 (+)
G88296 NA non-coding upstream 110711 78406858 ~ 78407204 (+)
G88240 NA non-coding upstream 148059 78369569 ~ 78369856 (+)
G88201 NA non-coding upstream 175048 78342596 ~ 78342867 (+)
G87567 NA non-coding upstream 545428 77971363 ~ 77972487 (+)
G88447 NA non-coding downstream 73 78518321 ~ 78518746 (+)
G88467 NA non-coding downstream 13240 78531488 ~ 78531722 (+)
G88477 NA non-coding downstream 19396 78537644 ~ 78537873 (+)
G88478 NA non-coding downstream 20129 78538377 ~ 78538579 (+)
G87159 NA other upstream 947445 77570015 ~ 77570470 (+)
G86614 NA other upstream 1393488 77123935 ~ 77124427 (+)
G86019 NA other upstream 1881979 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2058092 76457821 ~ 76459823 (+)
G83979 NA other upstream 3372403 75144864 ~ 75145512 (+)
G89667 NA other downstream 1030769 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 1233525 79720751 ~ 79765359 (+)
G91064 NA other downstream 2246866 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 3020083 81538331 ~ 81541400 (+)
G91779 NA other downstream 3359291 81877539 ~ 81879178 (+)

Expression


Co-expression Network