Gene
RNA
| Item | Value |
|---|---|
| gene id | G88854 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 78632597 ~ 78632871 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU97845 | True | 249 | lncRNA | 0.46 | 2 | 78632597 | 78632871 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529998 | LOC106577125 | coding | downstream | 323619 | 77924536 ~ 78308978 (-) |
| sh2d4ba | LOC106577151 | coding | downstream | 849626 | 77765944 ~ 77782971 (-) |
| LOC110529991 | LOC106577131 | coding | downstream | 897049 | 77695907 ~ 77735548 (-) |
| tbc1d12a | LOC106577134 | coding | downstream | 1008969 | 77606919 ~ 77623628 (-) |
| LOC110529957 | LOC106577135 | coding | downstream | 1089867 | 77535519 ~ 77542730 (-) |
| LOC110532724 | LOC106577124 | coding | upstream | 3413 | 78636284 ~ 78959395 (-) |
| LOC110530032 | ppp4r3b | coding | upstream | 447883 | 79080754 ~ 79092872 (-) |
| LOC110530078 | pnpt1 | coding | upstream | 460268 | 79093139 ~ 79109337 (-) |
| LOC110530099 | LOC106577117 | coding | upstream | 574631 | 79207502 ~ 79209199 (-) |
| LOC110530107 | rps27a | coding | upstream | 576993 | 79209864 ~ 79212568 (-) |
| G88471 | NA | non-coding | downstream | 97983 | 78534319 ~ 78534614 (-) |
| G88468 | NA | non-coding | downstream | 100965 | 78531423 ~ 78531632 (-) |
| G88466 | NA | non-coding | downstream | 101364 | 78531011 ~ 78531233 (-) |
| G88465 | NA | non-coding | downstream | 101969 | 78530328 ~ 78530628 (-) |
| G88448 | NA | non-coding | downstream | 113961 | 78518319 ~ 78518636 (-) |
| G88899 | NA | non-coding | upstream | 47976 | 78680847 ~ 78681316 (-) |
| G88982 | NA | non-coding | upstream | 187688 | 78820559 ~ 78820890 (-) |
| G89021 | NA | non-coding | upstream | 266448 | 78899319 ~ 78901018 (-) |
| G89436 | NA | non-coding | upstream | 439809 | 79072680 ~ 79077863 (-) |
| G87090 | NA | other | downstream | 1152658 | 77478603 ~ 77479939 (-) |
| G86448 | NA | other | downstream | 1764999 | 76866904 ~ 76867598 (-) |
| G86132 | LOC106577062 | other | downstream | 2024243 | 76606682 ~ 76608354 (-) |
| G86063 | NA | other | downstream | 2109116 | 76516251 ~ 76523481 (-) |
| ccser2a | ccser2 | other | downstream | 2232641 | 76324531 ~ 76399997 (-) |
| G89418 | NA | other | upstream | 416940 | 79049811 ~ 79050491 (-) |
| G90081 | NA | other | upstream | 901887 | 79534758 ~ 79535572 (-) |
| LOC110530200 | NA | other | upstream | 1250666 | 79862081 ~ 79917875 (-) |
| G90190 | NA | other | upstream | 1253804 | 79886675 ~ 79888180 (-) |
| G90382 | NA | other | upstream | 1508688 | 80141559 ~ 80142157 (-) |
