Gene
RNA
| Item | Value |
|---|---|
| gene id | G88738 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 78884512 ~ 78884957 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU97719 | True | 330 | lncRNA | 0.35 | 2 | 78884512 | 78884957 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530007 | LOC106577126 | coding | upstream | 259157 | 78541593 ~ 78625355 (+) |
| LOC118964520 | NA | coding | upstream | 355098 | 78526692 ~ 78529763 (+) |
| LOC118964491 | NA | coding | upstream | 453398 | 78430195 ~ 78431114 (+) |
| LOC110529992 | LOC106577130 | coding | upstream | 1120884 | 77752585 ~ 77763628 (+) |
| LOC110529985 | LOC106577132 | coding | upstream | 1219562 | 77662282 ~ 77664950 (+) |
| LOC110530018 | LOC106577123 | coding | downstream | 110475 | 78995432 ~ 79054597 (+) |
| LOC110530025 | rl19 | coding | downstream | 159629 | 79044586 ~ 79045036 (+) |
| cfap36 | cfap36 | coding | downstream | 172711 | 79057668 ~ 79080540 (+) |
| LOC110530085 | ccdc88a | coding | downstream | 241848 | 79126805 ~ 79207400 (+) |
| LOC110530093 | clhc1 | coding | downstream | 327598 | 79212555 ~ 79221785 (+) |
| G88716 | NA | non-coding | upstream | 20143 | 78862986 ~ 78864369 (+) |
| G88580 | NA | non-coding | upstream | 201262 | 78682967 ~ 78683250 (+) |
| G88546 | NA | non-coding | upstream | 246373 | 78636321 ~ 78638139 (+) |
| G88478 | NA | non-coding | upstream | 345933 | 78538377 ~ 78538579 (+) |
| G88477 | NA | non-coding | upstream | 346639 | 78537644 ~ 78537873 (+) |
| G89077 | NA | non-coding | downstream | 116342 | 79001299 ~ 79002659 (+) |
| G89048 | ppp4r3b | non-coding | downstream | 197614 | 79082571 ~ 79083009 (+) |
| G89127 | NA | non-coding | downstream | 223841 | 79108798 ~ 79109351 (+) |
| G89192 | NA | non-coding | downstream | 306359 | 79191316 ~ 79192045 (+) |
| G89140 | rps27a | non-coding | downstream | 324911 | 79209868 ~ 79212501 (+) |
| G87159 | NA | other | upstream | 1314042 | 77570015 ~ 77570470 (+) |
| G86614 | NA | other | upstream | 1760085 | 77123935 ~ 77124427 (+) |
| G86019 | NA | other | upstream | 2248576 | 76631745 ~ 76635936 (+) |
| LOC110529610 | NA | other | upstream | 2424689 | 76457821 ~ 76459823 (+) |
| G83979 | NA | other | upstream | 3739000 | 75144864 ~ 75145512 (+) |
| G89667 | NA | other | downstream | 664060 | 79549017 ~ 79549651 (+) |
| acoxl | acoxl | other | downstream | 866816 | 79720751 ~ 79765359 (+) |
| G91064 | NA | other | downstream | 1880157 | 80765114 ~ 80766155 (+) |
| G91541 | LOC106591086 | other | downstream | 2653374 | 81538331 ~ 81541400 (+) |
| G91779 | NA | other | downstream | 2992582 | 81877539 ~ 81879178 (+) |
