Gene
RNA
| Item | Value |
|---|---|
| gene id | G89021 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 78899319 ~ 78901018 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106534583 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU98026 | True | 434 | lncRNA | 0.37 | 4 | 78899319 | 78901018 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529998 | LOC106577125 | coding | downstream | 590341 | 77924536 ~ 78308978 (-) |
| sh2d4ba | LOC106577151 | coding | downstream | 1116348 | 77765944 ~ 77782971 (-) |
| LOC110529991 | LOC106577131 | coding | downstream | 1163771 | 77695907 ~ 77735548 (-) |
| tbc1d12a | LOC106577134 | coding | downstream | 1275691 | 77606919 ~ 77623628 (-) |
| LOC110529957 | LOC106577135 | coding | downstream | 1356589 | 77535519 ~ 77542730 (-) |
| LOC110530032 | ppp4r3b | coding | upstream | 179736 | 79080754 ~ 79092872 (-) |
| LOC110530078 | pnpt1 | coding | upstream | 192121 | 79093139 ~ 79109337 (-) |
| LOC110530099 | LOC106577117 | coding | upstream | 306484 | 79207502 ~ 79209199 (-) |
| LOC110530107 | rps27a | coding | upstream | 308846 | 79209864 ~ 79212568 (-) |
| LOC110530112 | LOC106577113 | coding | upstream | 356272 | 79257290 ~ 79351404 (-) |
| G88982 | NA | non-coding | downstream | 78429 | 78820559 ~ 78820890 (-) |
| G88899 | NA | non-coding | downstream | 218003 | 78680847 ~ 78681316 (-) |
| LOC110532724 | LOC106577124 | non-coding | downstream | 259285 | 78636284 ~ 78959395 (-) |
| G88854 | NA | non-coding | downstream | 266448 | 78632597 ~ 78632871 (-) |
| G88471 | NA | non-coding | downstream | 364705 | 78534319 ~ 78534614 (-) |
| G89436 | NA | non-coding | upstream | 171662 | 79072680 ~ 79077863 (-) |
| G89509 | NA | non-coding | upstream | 325683 | 79226701 ~ 79226908 (-) |
| G89510 | NA | non-coding | upstream | 325966 | 79226984 ~ 79227192 (-) |
| G89523 | NA | non-coding | upstream | 344177 | 79245195 ~ 79245480 (-) |
| G89525 | NA | non-coding | upstream | 362956 | 79263974 ~ 79264191 (-) |
| G87090 | NA | other | downstream | 1419380 | 77478603 ~ 77479939 (-) |
| G86448 | NA | other | downstream | 2031721 | 76866904 ~ 76867598 (-) |
| G86132 | LOC106577062 | other | downstream | 2290965 | 76606682 ~ 76608354 (-) |
| G86063 | NA | other | downstream | 2375838 | 76516251 ~ 76523481 (-) |
| ccser2a | ccser2 | other | downstream | 2499363 | 76324531 ~ 76399997 (-) |
| G89418 | NA | other | upstream | 148793 | 79049811 ~ 79050491 (-) |
| G90081 | NA | other | upstream | 633740 | 79534758 ~ 79535572 (-) |
| LOC110530200 | NA | other | upstream | 982519 | 79862081 ~ 79917875 (-) |
| G90190 | NA | other | upstream | 985657 | 79886675 ~ 79888180 (-) |
| G90382 | NA | other | upstream | 1240541 | 80141559 ~ 80142157 (-) |
