G89077


Basic Information

Item Value
gene id G89077
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79001299 ~ 79002659 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98093
gaaaaattgggcgtgcaaaattattcagcccccttaagttaatacatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagcttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98093 True 314 lncRNA 0.37 2 79001299 79002659

Neighbor

gene id symbol gene type direction distance location
LOC110530007 LOC106577126 coding upstream 375944 78541593 ~ 78625355 (+)
LOC118964520 NA coding upstream 471885 78526692 ~ 78529763 (+)
LOC118964491 NA coding upstream 570185 78430195 ~ 78431114 (+)
LOC110529992 LOC106577130 coding upstream 1237671 77752585 ~ 77763628 (+)
LOC110529985 LOC106577132 coding upstream 1336349 77662282 ~ 77664950 (+)
LOC110530025 rl19 coding downstream 41927 79044586 ~ 79045036 (+)
cfap36 cfap36 coding downstream 55009 79057668 ~ 79080540 (+)
LOC110530085 ccdc88a coding downstream 124146 79126805 ~ 79207400 (+)
LOC110530093 clhc1 coding downstream 209896 79212555 ~ 79221785 (+)
rtn4 rtn4 coding downstream 227007 79229666 ~ 79257493 (+)
G88738 NA non-coding upstream 116342 78884512 ~ 78884957 (+)
G88716 NA non-coding upstream 136930 78862986 ~ 78864369 (+)
G88580 NA non-coding upstream 318049 78682967 ~ 78683250 (+)
G88546 NA non-coding upstream 363160 78636321 ~ 78638139 (+)
G88478 NA non-coding upstream 462720 78538377 ~ 78538579 (+)
G89048 ppp4r3b non-coding downstream 79912 79082571 ~ 79083009 (+)
G89127 NA non-coding downstream 106139 79108798 ~ 79109351 (+)
G89192 NA non-coding downstream 188657 79191316 ~ 79192045 (+)
G89140 rps27a non-coding downstream 207209 79209868 ~ 79212501 (+)
G89196 NA non-coding downstream 224575 79227234 ~ 79227545 (+)
G87159 NA other upstream 1430829 77570015 ~ 77570470 (+)
G86614 NA other upstream 1876872 77123935 ~ 77124427 (+)
G86019 NA other upstream 2365363 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2541476 76457821 ~ 76459823 (+)
G83979 NA other upstream 3855787 75144864 ~ 75145512 (+)
G89667 NA other downstream 546358 79549017 ~ 79549651 (+)
acoxl acoxl other downstream 749114 79720751 ~ 79765359 (+)
G91064 NA other downstream 1762455 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2535672 81538331 ~ 81541400 (+)
G91779 NA other downstream 2874880 81877539 ~ 81879178 (+)

Expression


Co-expression Network