G89436


Basic Information

Item Value
gene id G89436
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79072680 ~ 79077863 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98471
CTGATGCCAACTTAGAAGGGGGAGATGTGCTGGTATTGGCTGGACTCATCTGCCCACTACCTCCAGCAGCCTTCAGCTCCCCTCTCTGAGGAGATGTACTGTTCACCTACATGGAAGGCACAGGGCAGCCATATCATTGCATCTAGCAGTTCTAGTTATGCCACACTGATGTTCACAAAGttcaggttgtacagctaacattTATGGGCGACCACAGGTCTAACATAGTGCAATAGCAGACTGTGTGCACTATACTACTAGGAGAGTTACCGTTGCATTTCCATTGACCAGAGGGACAGAGGGCTGGTGGCTACCACTGTCCCACACCTTCGCCTCAGCCTTGGGCTGAGCATGTGCAACATACAAGAGAGTTGTCACATACCCCACTTTAGGTTAATATACAGGCTAAAAAAACATACATTGTAACGATAATGCGGAAAAACAGTGTTACAGGTCAAACCTTTAGTTAACAATGTGAGTCCATGTCCTAGAACAGGGCTGGATATCTACCAGATCGTGCACCACTCTGCATTAGTTGATTGATTGAAGACTGTCTAGTAACGTGATATGTAGGGACTGTAAGCTGCTGTACTCACTTCCCCTTCTTTTGTGTTGCTGCTCAACTACATAGCTCAAAAGAATACTATGGCTATGAATACATGAAATAGGAACCATTTATCACATTCTACAGGCAGACAAAGTTATGTTCAGTATTTTTGTATTACAACACTCTGAGTCAGTATTAGGTTCATAACTCACCTTGTTGGTATGTTGAATGGAGGTGGGCCTCTGGATGCTGACTGCCTCTAGAACTGGCCTATCGGAGCAGCTTCTGGACGTGGAGCCGATCTCCTCTGACTGCAATCGGCGAGCCATCTCTAGGTCATAATCCTCCTTTGACCTTTCAGAACCTCCTGTATAATCTTCATCTCCT

Function

NR:

description
cilia- and flagella-associated protein 36 isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98471 True 934 lncRNA 0.46 2 79072680 79077863

Neighbor

gene id symbol gene type direction distance location
LOC110532724 LOC106577124 coding downstream 113285 78636284 ~ 78959395 (-)
LOC110529998 LOC106577125 coding downstream 763702 77924536 ~ 78308978 (-)
sh2d4ba LOC106577151 coding downstream 1289709 77765944 ~ 77782971 (-)
LOC110529991 LOC106577131 coding downstream 1337132 77695907 ~ 77735548 (-)
tbc1d12a LOC106577134 coding downstream 1449052 77606919 ~ 77623628 (-)
LOC110530032 ppp4r3b coding upstream 2891 79080754 ~ 79092872 (-)
LOC110530078 pnpt1 coding upstream 15276 79093139 ~ 79109337 (-)
LOC110530099 LOC106577117 coding upstream 129639 79207502 ~ 79209199 (-)
LOC110530107 rps27a coding upstream 132001 79209864 ~ 79212568 (-)
LOC110530112 LOC106577113 coding upstream 179427 79257290 ~ 79351404 (-)
G89021 NA non-coding downstream 171662 78899319 ~ 78901018 (-)
G88982 NA non-coding downstream 251790 78820559 ~ 78820890 (-)
G88899 NA non-coding downstream 391364 78680847 ~ 78681316 (-)
G88854 NA non-coding downstream 439809 78632597 ~ 78632871 (-)
G89509 NA non-coding upstream 148838 79226701 ~ 79226908 (-)
G89510 NA non-coding upstream 149121 79226984 ~ 79227192 (-)
G89523 NA non-coding upstream 167332 79245195 ~ 79245480 (-)
G89525 NA non-coding upstream 186111 79263974 ~ 79264191 (-)
G89526 NA non-coding upstream 186348 79264211 ~ 79264830 (-)
G89418 NA other downstream 22189 79049811 ~ 79050491 (-)
G87090 NA other downstream 1592741 77478603 ~ 77479939 (-)
G86448 NA other downstream 2205082 76866904 ~ 76867598 (-)
G86132 LOC106577062 other downstream 2464326 76606682 ~ 76608354 (-)
G86063 NA other downstream 2549199 76516251 ~ 76523481 (-)
G90081 NA other upstream 456895 79534758 ~ 79535572 (-)
LOC110530200 NA other upstream 805674 79862081 ~ 79917875 (-)
G90190 NA other upstream 808812 79886675 ~ 79888180 (-)
G90382 NA other upstream 1063696 80141559 ~ 80142157 (-)
nphp1 LOC106577164 other upstream 1862861 80940215 ~ 80966643 (-)

Expression


Co-expression Network