G89196


Basic Information

Item Value
gene id G89196
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79227234 ~ 79227545 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98214
aatgCGGtaatggaatcctgacctgttcaccggacgtgctacctgtcccagacctattatttgaccatgctggtcatttatgaacatttgaacatcttggtcatgttctgttataatctccacccggcacagccagaagaggactggccacccctcatagcctggttcctctctagatttcttcctaggtttcggcctttctaggtagtttttcctagccaacgcgcttcaacacctgcattgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtacgaaaggc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98214 True 312 lncRNA 0.48 1 79227234 79227545

Neighbor

gene id symbol gene type direction distance location
LOC110530093 clhc1 coding upstream 5449 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 19834 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 146694 79057668 ~ 79080540 (+)
LOC110530018 LOC106577123 coding upstream 172637 78995432 ~ 79054597 (+)
LOC110530025 rl19 coding upstream 182198 79044586 ~ 79045036 (+)
rtn4 rtn4 coding downstream 2121 79229666 ~ 79257493 (+)
LOC110530152 LOC106577111 coding downstream 336042 79563587 ~ 79566569 (+)
LOC110530167 st6b1 coding downstream 480625 79708170 ~ 79717946 (+)
acoxl acoxl coding downstream 493206 79720751 ~ 79765359 (+)
bcl2l11 bcl2l11 coding downstream 538688 79766233 ~ 79782247 (+)
G89140 rps27a non-coding upstream 14733 79209868 ~ 79212501 (+)
G89192 NA non-coding upstream 35189 79191316 ~ 79192045 (+)
G89127 NA non-coding upstream 117883 79108798 ~ 79109351 (+)
G89048 ppp4r3b non-coding upstream 144225 79082571 ~ 79083009 (+)
G89077 NA non-coding upstream 224575 79001299 ~ 79002659 (+)
G89197 NA non-coding downstream 248 79227793 ~ 79228083 (+)
G89203 NA non-coding downstream 13780 79241325 ~ 79241557 (+)
G89144 NA non-coding downstream 30585 79258130 ~ 79259797 (+)
G89147 NA non-coding downstream 32745 79260290 ~ 79261504 (+)
G89209 NA non-coding downstream 35309 79262854 ~ 79263662 (+)
G87159 NA other upstream 1656764 77570015 ~ 77570470 (+)
G86614 NA other upstream 2102807 77123935 ~ 77124427 (+)
G86019 NA other upstream 2591298 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2767411 76457821 ~ 76459823 (+)
G83979 NA other upstream 4081722 75144864 ~ 75145512 (+)
G89667 NA other downstream 321472 79549017 ~ 79549651 (+)
G91064 NA other downstream 1537569 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2310786 81538331 ~ 81541400 (+)
G91779 NA other downstream 2649994 81877539 ~ 81879178 (+)

Expression


Co-expression Network