G89209


Basic Information

Item Value
gene id G89209
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79262854 ~ 79263662 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98227
GATATACGAGTATCCATCATGGTGAGAACACACTGTGCAACATGATCAAATGGTCAAGATGGCTGTATTAAAAAGACTGACACAGTTGCCATGATGGTAAAAAAAAAGGCTTTTATTAGACTATTCAAACATAATGACCTTGACAGCAAAATAAAATGGACCTCATTCCACTATCTATTTTGTGTGCGGTTTAGTAAATCCAGTATGTATGTCAGCCTATCAAAACCCCCATGGCTTGTAACAACAACAAGACTCCAGCTGTATTCTACTTCCCGTTCAGTGTGGCATACCTCGATGAACCTGCTGTCTGCAGAGAAGTCCATCTGGATAACGAAGCTGGAGATGTCCTTACAGTAGCCCACGCGGTTGAGTGTGGGGCCCAATGTAAGGTCATACAGGTCAACCGTACTCTCCACTGAGCCCACTGCCAGGAGGTGTTTGTCTGGACTGAACCTGAGAGGGTCACAGAatagacatactgtacataatgtATATATGACATTGAACCACACAAACATTCTCATAATTAAAATGTAATTGACTGGCCTTTAACTGACCCAATCCCATTTAAAATTAGTTCACTTCCCCCTTTTGGTTAAATCAGTCTCCACAGTTTGAAAAAATGAATTGTTTAATTTTGGCTAGTTGTTTTCTTGGTTTGAACCACAGGTTAAATTGGGAATTCAGATTTTGGGGAGCCATATTTTGGgattagggttgagccagggttGAACATAAGGCTATGGTTAGAGTAATGCAAAATTTGGGTTAGGTTTGTGGTTGAGGATAGGGTTAAGATTGAACAGGGA

Function

NR:

description
echinoderm microtubule-associated protein-like 6 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98227 True 809 lncRNA 0.41 1 79262854 79263662

Neighbor

gene id symbol gene type direction distance location
rtn4 rtn4 coding upstream 5361 79229666 ~ 79257493 (+)
LOC110530093 clhc1 coding upstream 41069 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 55454 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 182314 79057668 ~ 79080540 (+)
LOC110530025 rl19 coding upstream 217818 79044586 ~ 79045036 (+)
LOC110530152 LOC106577111 coding downstream 299925 79563587 ~ 79566569 (+)
LOC110530167 st6b1 coding downstream 444508 79708170 ~ 79717946 (+)
acoxl acoxl coding downstream 457089 79720751 ~ 79765359 (+)
bcl2l11 bcl2l11 coding downstream 502571 79766233 ~ 79782247 (+)
vip LOC106577104 coding downstream 661034 79924696 ~ 79928909 (+)
G89147 NA non-coding upstream 1350 79260290 ~ 79261504 (+)
G89144 NA non-coding upstream 3057 79258130 ~ 79259797 (+)
G89203 NA non-coding upstream 21297 79241325 ~ 79241557 (+)
G89197 NA non-coding upstream 34771 79227793 ~ 79228083 (+)
G89196 NA non-coding upstream 35309 79227234 ~ 79227545 (+)
G89210 NA non-coding downstream 528 79264190 ~ 79264830 (+)
G89211 NA non-coding downstream 1210 79264872 ~ 79266074 (+)
G89212 NA non-coding downstream 5665 79269327 ~ 79270054 (+)
G89215 NA non-coding downstream 9158 79272820 ~ 79273063 (+)
G89216 NA non-coding downstream 9534 79273196 ~ 79273636 (+)
G87159 NA other upstream 1692384 77570015 ~ 77570470 (+)
G86614 NA other upstream 2138427 77123935 ~ 77124427 (+)
G86019 NA other upstream 2626918 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2803031 76457821 ~ 76459823 (+)
G83979 NA other upstream 4117342 75144864 ~ 75145512 (+)
G89667 NA other downstream 285355 79549017 ~ 79549651 (+)
G91064 NA other downstream 1501452 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2274669 81538331 ~ 81541400 (+)
G91779 NA other downstream 2613877 81877539 ~ 81879178 (+)

Expression


Co-expression Network