G89210


Basic Information

Item Value
gene id G89210
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79264190 ~ 79264830 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98228
cttgtctcatcgcgcaccagcgactcctgtggcgggctaggcgcagtgcgcgctaaccaaggttgccaggtgcacggtgtttcctccgacacattggtgcggctggcttccaggttggatggcgctgtgttaagaagcagtgcggcttggttgggttgtgtatcggaggacgcatgactttcaaccttcgtctctcccgagcccgtacgggagttgtagcgatgagaaaagatagtagctactaataacaattggataccacgaaattggggagaaaaagggctgtaaataaataaataaataaataaataaataaaattaaatttaaaaaaagatgtCAAAGATGTCCCATAACTCTTTGAGAAAATGGGTTCAGTGTTGCTAGTTAGCAATGGTGCTAGTCATTATCAATGGCACTGGTCCAAGAAATGAGTTTATTTTCGAATGCTGCCTGATGTAATAATTACGTTGGGTTAACCTGTATATTTTCGAcctagggttgaactgggatgagGACATGATGCTAGGGCAAGATTTactgccaggatgtggacatgaagttagggttagggctgatgctagggttactgccaggatatggacatgaagttagggttagggctgatgctaGGGTTACTGCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98228 True 641 lncRNA 0.60 1 79264190 79264830

Neighbor

gene id symbol gene type direction distance location
rtn4 rtn4 coding upstream 6697 79229666 ~ 79257493 (+)
LOC110530093 clhc1 coding upstream 42405 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 56790 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 183650 79057668 ~ 79080540 (+)
LOC110530025 rl19 coding upstream 219154 79044586 ~ 79045036 (+)
LOC110530152 LOC106577111 coding downstream 298757 79563587 ~ 79566569 (+)
LOC110530167 st6b1 coding downstream 443340 79708170 ~ 79717946 (+)
acoxl acoxl coding downstream 455921 79720751 ~ 79765359 (+)
bcl2l11 bcl2l11 coding downstream 501403 79766233 ~ 79782247 (+)
vip LOC106577104 coding downstream 659866 79924696 ~ 79928909 (+)
G89209 NA non-coding upstream 528 79262854 ~ 79263662 (+)
G89147 NA non-coding upstream 2686 79260290 ~ 79261504 (+)
G89144 NA non-coding upstream 4393 79258130 ~ 79259797 (+)
G89203 NA non-coding upstream 22633 79241325 ~ 79241557 (+)
G89197 NA non-coding upstream 36107 79227793 ~ 79228083 (+)
G89211 NA non-coding downstream 42 79264872 ~ 79266074 (+)
G89212 NA non-coding downstream 4497 79269327 ~ 79270054 (+)
G89215 NA non-coding downstream 7990 79272820 ~ 79273063 (+)
G89216 NA non-coding downstream 8366 79273196 ~ 79273636 (+)
G89217 NA non-coding downstream 8924 79273754 ~ 79274561 (+)
G87159 NA other upstream 1693720 77570015 ~ 77570470 (+)
G86614 NA other upstream 2139763 77123935 ~ 77124427 (+)
G86019 NA other upstream 2628254 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2804367 76457821 ~ 76459823 (+)
G83979 NA other upstream 4118678 75144864 ~ 75145512 (+)
G89667 NA other downstream 284187 79549017 ~ 79549651 (+)
G91064 NA other downstream 1500284 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2273501 81538331 ~ 81541400 (+)
G91779 NA other downstream 2612709 81877539 ~ 81879178 (+)

Expression


Co-expression Network