G89211


Basic Information

Item Value
gene id G89211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79264872 ~ 79266074 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98229
ctaGGGTTAGTTACTGCCAGGATGTGGAAatgaagttagggttagttactgccaggatgtggacatgaagctagggttagggctgatgctagggttactgccaggatgtggacatgaagctagggttagggctgatgctaGGGTTACTCCCAGGATATGGACATTAAGCTAGGGTTAGTTactgccaggatgtggacatgaagttagggttagggctgatgccAGGATTACTGccatgatgtggacatgaagctagggttagggctgatgctagggttactgccaggatgtggacatgaagttagggttagggctgatgctagggttgctgccaggatgtggacatgaagctagggttagggctgatgccAGGATTACTGccatgatgtggacatgaagctagggttagggctgatgctagggttagggctgatgctaGGGTTAGTTATTGCCagcatgtggacatgaagttagggttagggctgatgctTGGGTTAGTTATTGCCagcatgtggacatgaagttagggttagggctgatgctTGGGTTAGTTACTGCCAGCATGTGGACACAAAGCTAAGGTTAGGGCTGATGCTAGGGTTactgccaggatgtggacatgaagctagggttagggctgatgctagggttactgccaggatgtggacatgaagctagggttagggctgatgctagggttagtgccaggatgtggacatgaagttagggttagggctgatgctagggttactgccaggatgtggacattaagctagggttagggctgatgctagggttactgccaggatgtggacatgaagctagggttagggctgatgctaGGGTTACTGCCAGGATATGGAcacgaagctagggttagggctgatgctagggttactgccaggatgtggacatgaagctaaggttagggctgatgctagggttactgccaggatgtggacatgaagctagggttagggctgatgctaGGATTactgccaggatgtggacatgaagctaaggttagggctgatgctagggttactgccaggatgtggacatgaagttagggttagggctgatgctaGGGTTAGTTACTGCCAGGATATGGACACAAAGCTAAGGTTAGGGCTGATGCTAGGGTTactgccagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98229 True 1154 lncRNA 0.51 2 79264872 79266074

Neighbor

gene id symbol gene type direction distance location
rtn4 rtn4 coding upstream 7379 79229666 ~ 79257493 (+)
LOC110530093 clhc1 coding upstream 43087 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 57472 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 184332 79057668 ~ 79080540 (+)
LOC110530025 rl19 coding upstream 219836 79044586 ~ 79045036 (+)
LOC110530152 LOC106577111 coding downstream 297513 79563587 ~ 79566569 (+)
LOC110530167 st6b1 coding downstream 442096 79708170 ~ 79717946 (+)
acoxl acoxl coding downstream 454677 79720751 ~ 79765359 (+)
bcl2l11 bcl2l11 coding downstream 500159 79766233 ~ 79782247 (+)
vip LOC106577104 coding downstream 658622 79924696 ~ 79928909 (+)
G89210 NA non-coding upstream 42 79264190 ~ 79264830 (+)
G89209 NA non-coding upstream 1210 79262854 ~ 79263662 (+)
G89147 NA non-coding upstream 3368 79260290 ~ 79261504 (+)
G89144 NA non-coding upstream 5075 79258130 ~ 79259797 (+)
G89203 NA non-coding upstream 23315 79241325 ~ 79241557 (+)
G89212 NA non-coding downstream 3253 79269327 ~ 79270054 (+)
G89215 NA non-coding downstream 6746 79272820 ~ 79273063 (+)
G89216 NA non-coding downstream 7122 79273196 ~ 79273636 (+)
G89217 NA non-coding downstream 7680 79273754 ~ 79274561 (+)
G89218 NA non-coding downstream 8491 79274565 ~ 79275161 (+)
G87159 NA other upstream 1694402 77570015 ~ 77570470 (+)
G86614 NA other upstream 2140445 77123935 ~ 77124427 (+)
G86019 NA other upstream 2628936 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2805049 76457821 ~ 76459823 (+)
G83979 NA other upstream 4119360 75144864 ~ 75145512 (+)
G89667 NA other downstream 282943 79549017 ~ 79549651 (+)
G91064 NA other downstream 1499040 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2272257 81538331 ~ 81541400 (+)
G91779 NA other downstream 2611465 81877539 ~ 81879178 (+)

Expression


Co-expression Network