Gene
RNA
| Item | Value |
|---|---|
| gene id | G89212 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 79269327 ~ 79270054 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: echinoderm microtubule-associated protein-like 6 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU98231 | True | 728 | lncRNA | 0.46 | 1 | 79269327 | 79270054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rtn4 | rtn4 | coding | upstream | 11834 | 79229666 ~ 79257493 (+) |
| LOC110530093 | clhc1 | coding | upstream | 47542 | 79212555 ~ 79221785 (+) |
| LOC110530085 | ccdc88a | coding | upstream | 61927 | 79126805 ~ 79207400 (+) |
| cfap36 | cfap36 | coding | upstream | 188787 | 79057668 ~ 79080540 (+) |
| LOC110530025 | rl19 | coding | upstream | 224291 | 79044586 ~ 79045036 (+) |
| LOC110530152 | LOC106577111 | coding | downstream | 293533 | 79563587 ~ 79566569 (+) |
| LOC110530167 | st6b1 | coding | downstream | 438116 | 79708170 ~ 79717946 (+) |
| acoxl | acoxl | coding | downstream | 450697 | 79720751 ~ 79765359 (+) |
| bcl2l11 | bcl2l11 | coding | downstream | 496179 | 79766233 ~ 79782247 (+) |
| vip | LOC106577104 | coding | downstream | 654642 | 79924696 ~ 79928909 (+) |
| G89211 | NA | non-coding | upstream | 3253 | 79264872 ~ 79266074 (+) |
| G89210 | NA | non-coding | upstream | 4497 | 79264190 ~ 79264830 (+) |
| G89209 | NA | non-coding | upstream | 5665 | 79262854 ~ 79263662 (+) |
| G89147 | NA | non-coding | upstream | 7823 | 79260290 ~ 79261504 (+) |
| G89144 | NA | non-coding | upstream | 9530 | 79258130 ~ 79259797 (+) |
| G89215 | NA | non-coding | downstream | 2766 | 79272820 ~ 79273063 (+) |
| G89216 | NA | non-coding | downstream | 3142 | 79273196 ~ 79273636 (+) |
| G89217 | NA | non-coding | downstream | 3700 | 79273754 ~ 79274561 (+) |
| G89218 | NA | non-coding | downstream | 4511 | 79274565 ~ 79275161 (+) |
| G89220 | NA | non-coding | downstream | 8130 | 79278184 ~ 79278416 (+) |
| G87159 | NA | other | upstream | 1698857 | 77570015 ~ 77570470 (+) |
| G86614 | NA | other | upstream | 2144900 | 77123935 ~ 77124427 (+) |
| G86019 | NA | other | upstream | 2633391 | 76631745 ~ 76635936 (+) |
| LOC110529610 | NA | other | upstream | 2809504 | 76457821 ~ 76459823 (+) |
| G83979 | NA | other | upstream | 4123815 | 75144864 ~ 75145512 (+) |
| G89667 | NA | other | downstream | 278963 | 79549017 ~ 79549651 (+) |
| G91064 | NA | other | downstream | 1495060 | 80765114 ~ 80766155 (+) |
| G91541 | LOC106591086 | other | downstream | 2268277 | 81538331 ~ 81541400 (+) |
| G91779 | NA | other | downstream | 2607485 | 81877539 ~ 81879178 (+) |
