G89216


Basic Information

Item Value
gene id G89216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79273196 ~ 79273636 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98235
TTCCTGCCAGCGCCACAcagtgatggtgtgttcaggctcCACCCCCACAGAGAGCAGCAGCTTTCCCGTGGCGCTGAAGTTGACGTAGCCCACACCCTTGGCGTGAGAGCAACGCAGGATGGACAGCGTCTGTTTACTCATGGCGTCCCACACATGGATGGAGGGGGTGGTGCCTGGAGCACAGAGAAAACCACCATAGTCTGATCCAGTATACAGGGCTACAGTATGGAGCAGTCCAGGGCAATTGATTTGCTGTATTATAGTACTGGGTAAAAAAGGTCAGAAAAGTAGGTTTGAATACAGAGGGATAACTACTGGAGGATAGAAAACACAGGACAGGCCACTGGGAAACTGCAGGAGAACAGCAATAAGAGGGTAAACCTATAGGGGTGGTTTCCCCGACATAGATTAAGATTTATTTTTCATTGAGCTTGCTTTTTT

Function

NR:

description
hypothetical protein cypCar_00044732, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98235 True 441 lncRNA 0.49 1 79273196 79273636

Neighbor

gene id symbol gene type direction distance location
rtn4 rtn4 coding upstream 15703 79229666 ~ 79257493 (+)
LOC110530093 clhc1 coding upstream 51411 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 65796 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 192656 79057668 ~ 79080540 (+)
LOC110530025 rl19 coding upstream 228160 79044586 ~ 79045036 (+)
LOC110530152 LOC106577111 coding downstream 289951 79563587 ~ 79566569 (+)
LOC110530167 st6b1 coding downstream 434534 79708170 ~ 79717946 (+)
acoxl acoxl coding downstream 447115 79720751 ~ 79765359 (+)
bcl2l11 bcl2l11 coding downstream 492597 79766233 ~ 79782247 (+)
vip LOC106577104 coding downstream 651060 79924696 ~ 79928909 (+)
G89215 NA non-coding upstream 133 79272820 ~ 79273063 (+)
G89212 NA non-coding upstream 3142 79269327 ~ 79270054 (+)
G89211 NA non-coding upstream 7122 79264872 ~ 79266074 (+)
G89210 NA non-coding upstream 8366 79264190 ~ 79264830 (+)
G89209 NA non-coding upstream 9534 79262854 ~ 79263662 (+)
G89217 NA non-coding downstream 118 79273754 ~ 79274561 (+)
G89218 NA non-coding downstream 929 79274565 ~ 79275161 (+)
G89220 NA non-coding downstream 4548 79278184 ~ 79278416 (+)
G89223 NA non-coding downstream 6778 79280414 ~ 79280701 (+)
G89224 NA non-coding downstream 7706 79281342 ~ 79281546 (+)
G87159 NA other upstream 1702726 77570015 ~ 77570470 (+)
G86614 NA other upstream 2148769 77123935 ~ 77124427 (+)
G86019 NA other upstream 2637260 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2813373 76457821 ~ 76459823 (+)
G83979 NA other upstream 4127684 75144864 ~ 75145512 (+)
G89667 NA other downstream 275381 79549017 ~ 79549651 (+)
G91064 NA other downstream 1491478 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2264695 81538331 ~ 81541400 (+)
G91779 NA other downstream 2603903 81877539 ~ 81879178 (+)

Expression


Co-expression Network