G89220


Basic Information

Item Value
gene id G89220
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79278184 ~ 79278416 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98239
ACCCTGGGGTCCCTGTGCAAACTGTGCAATAGAGCTCctatgagaggaggaggaagggcacAGGAAGAGAGAAATGAGTCAGTGCCTCGATCTCAACCCCCAAGGGGTTATGGGAAAACAAGGTCCTGTGATGTCTGGGGCTCCATGAGAGGggaagaagaaaagagagggggagagacagaaacagaaagaaagaACGGTCTCCTCCAGCATCACTTGGTAAATCATCATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98239 True 233 lncRNA 0.51 1 79278184 79278416

Neighbor

gene id symbol gene type direction distance location
rtn4 rtn4 coding upstream 20691 79229666 ~ 79257493 (+)
LOC110530093 clhc1 coding upstream 56399 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 70784 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 197644 79057668 ~ 79080540 (+)
LOC110530025 rl19 coding upstream 233148 79044586 ~ 79045036 (+)
LOC110530152 LOC106577111 coding downstream 285171 79563587 ~ 79566569 (+)
LOC110530167 st6b1 coding downstream 429754 79708170 ~ 79717946 (+)
acoxl acoxl coding downstream 442335 79720751 ~ 79765359 (+)
bcl2l11 bcl2l11 coding downstream 487817 79766233 ~ 79782247 (+)
vip LOC106577104 coding downstream 646280 79924696 ~ 79928909 (+)
G89218 NA non-coding upstream 3023 79274565 ~ 79275161 (+)
G89217 NA non-coding upstream 3623 79273754 ~ 79274561 (+)
G89216 NA non-coding upstream 4548 79273196 ~ 79273636 (+)
G89215 NA non-coding upstream 5121 79272820 ~ 79273063 (+)
G89212 NA non-coding upstream 8130 79269327 ~ 79270054 (+)
G89223 NA non-coding downstream 1998 79280414 ~ 79280701 (+)
G89224 NA non-coding downstream 2926 79281342 ~ 79281546 (+)
G89226 NA non-coding downstream 5578 79283994 ~ 79284283 (+)
G89228 NA non-coding downstream 8681 79287097 ~ 79287575 (+)
G89230 NA non-coding downstream 11451 79289867 ~ 79290231 (+)
G87159 NA other upstream 1707714 77570015 ~ 77570470 (+)
G86614 NA other upstream 2153757 77123935 ~ 77124427 (+)
G86019 NA other upstream 2642248 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 2818361 76457821 ~ 76459823 (+)
G83979 NA other upstream 4132672 75144864 ~ 75145512 (+)
G89667 NA other downstream 270601 79549017 ~ 79549651 (+)
G91064 NA other downstream 1486698 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 2259915 81538331 ~ 81541400 (+)
G91779 NA other downstream 2599123 81877539 ~ 81879178 (+)

Expression


Co-expression Network