G89544


Basic Information

Item Value
gene id G89544
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79313420 ~ 79313833 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98590
cccccatcttctgttttatccacctctctctctctctctcctccatcttctgttttatccacctctcccccatcttctgttttatccacctctctctatctctcctccatcttctgttttatccacctctctctctctcctccatcttctgttttatccacctctctctctacctctcctccatcttctgttttatcgacttctctctatctctcctctatcttctgttttatccacctctctctctctcctccatcttctgttttatccacctctcccccatcttctgttttatccacctctctctatctctctctcctccatcttctgttttatccacctctctctatttatctctcccccatcttctgttttatccacctctcccccatcttctgttttatccacctctct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98590 True 414 lncRNA 0.45 1 79313420 79313833

Neighbor

gene id symbol gene type direction distance location
LOC110530107 rps27a coding downstream 100852 79209864 ~ 79212568 (-)
LOC110530099 LOC106577117 coding downstream 104221 79207502 ~ 79209199 (-)
LOC110530078 pnpt1 coding downstream 204083 79093139 ~ 79109337 (-)
LOC110530032 ppp4r3b coding downstream 220548 79080754 ~ 79092872 (-)
LOC110532724 LOC106577124 coding downstream 354025 78636284 ~ 78959395 (-)
LOC110530138 LOC100380625 coding upstream 47764 79361597 ~ 79495170 (-)
LOC100136270 LOC106577110 coding upstream 298804 79612637 ~ 79692579 (-)
LOC110530200 NA coding upstream 548248 79862081 ~ 79917875 (-)
mtrf1l mtrf1l coding upstream 621989 79935822 ~ 79946936 (-)
LOC110530250 LOC106577100 coding upstream 721453 80035286 ~ 80058352 (-)
G89540 NA non-coding downstream 10528 79302619 ~ 79302892 (-)
G89532 NA non-coding downstream 35832 79277243 ~ 79277588 (-)
G89531 NA non-coding downstream 36366 79276831 ~ 79277054 (-)
G89528 LOC106581475 non-coding downstream 42797 79270388 ~ 79270623 (-)
G89527 NA non-coding downstream 43076 79270046 ~ 79270344 (-)
G89547 NA non-coding upstream 5128 79318961 ~ 79319366 (-)
G89560 NA non-coding upstream 38941 79352774 ~ 79353088 (-)
G89636 NA non-coding upstream 188628 79502461 ~ 79502674 (-)
G90063 NA non-coding upstream 192883 79506716 ~ 79506944 (-)
G90070 NA non-coding upstream 205250 79519083 ~ 79519485 (-)
G89418 NA other downstream 262929 79049811 ~ 79050491 (-)
G87090 NA other downstream 1833481 77478603 ~ 77479939 (-)
G86448 NA other downstream 2445822 76866904 ~ 76867598 (-)
G86132 LOC106577062 other downstream 2705066 76606682 ~ 76608354 (-)
G86063 NA other downstream 2789939 76516251 ~ 76523481 (-)
G90081 NA other upstream 220925 79534758 ~ 79535572 (-)
G90190 NA other upstream 572842 79886675 ~ 79888180 (-)
G90382 NA other upstream 827726 80141559 ~ 80142157 (-)
nphp1 LOC106577164 other upstream 1626891 80940215 ~ 80966643 (-)

Expression


Co-expression Network