Gene
RNA
| Item | Value |
|---|---|
| gene id | G89547 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 79318961 ~ 79319366 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: putative uncharacterized protein DDB_G0290521 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU98593 | True | 328 | lncRNA | 0.34 | 2 | 79318961 | 79319366 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530107 | rps27a | coding | downstream | 106393 | 79209864 ~ 79212568 (-) |
| LOC110530099 | LOC106577117 | coding | downstream | 109762 | 79207502 ~ 79209199 (-) |
| LOC110530078 | pnpt1 | coding | downstream | 209624 | 79093139 ~ 79109337 (-) |
| LOC110530032 | ppp4r3b | coding | downstream | 226089 | 79080754 ~ 79092872 (-) |
| LOC110532724 | LOC106577124 | coding | downstream | 359566 | 78636284 ~ 78959395 (-) |
| LOC110530138 | LOC100380625 | coding | upstream | 42231 | 79361597 ~ 79495170 (-) |
| LOC100136270 | LOC106577110 | coding | upstream | 293271 | 79612637 ~ 79692579 (-) |
| LOC110530200 | NA | coding | upstream | 542715 | 79862081 ~ 79917875 (-) |
| mtrf1l | mtrf1l | coding | upstream | 616456 | 79935822 ~ 79946936 (-) |
| LOC110530250 | LOC106577100 | coding | upstream | 715920 | 80035286 ~ 80058352 (-) |
| G89544 | NA | non-coding | downstream | 5128 | 79313420 ~ 79313833 (-) |
| G89540 | NA | non-coding | downstream | 16069 | 79302619 ~ 79302892 (-) |
| G89532 | NA | non-coding | downstream | 41373 | 79277243 ~ 79277588 (-) |
| G89531 | NA | non-coding | downstream | 41907 | 79276831 ~ 79277054 (-) |
| G89528 | LOC106581475 | non-coding | downstream | 48338 | 79270388 ~ 79270623 (-) |
| G89560 | NA | non-coding | upstream | 33408 | 79352774 ~ 79353088 (-) |
| G89636 | NA | non-coding | upstream | 183095 | 79502461 ~ 79502674 (-) |
| G90063 | NA | non-coding | upstream | 187350 | 79506716 ~ 79506944 (-) |
| G90070 | NA | non-coding | upstream | 199717 | 79519083 ~ 79519485 (-) |
| G90074 | NA | non-coding | upstream | 208208 | 79527574 ~ 79527832 (-) |
| G89418 | NA | other | downstream | 268470 | 79049811 ~ 79050491 (-) |
| G87090 | NA | other | downstream | 1839022 | 77478603 ~ 77479939 (-) |
| G86448 | NA | other | downstream | 2451363 | 76866904 ~ 76867598 (-) |
| G86132 | LOC106577062 | other | downstream | 2710607 | 76606682 ~ 76608354 (-) |
| G86063 | NA | other | downstream | 2795480 | 76516251 ~ 76523481 (-) |
| G90081 | NA | other | upstream | 215392 | 79534758 ~ 79535572 (-) |
| G90190 | NA | other | upstream | 567309 | 79886675 ~ 79888180 (-) |
| G90382 | NA | other | upstream | 822193 | 80141559 ~ 80142157 (-) |
| nphp1 | LOC106577164 | other | upstream | 1621358 | 80940215 ~ 80966643 (-) |
