XLOC_020336 (hnrnpm)


Basic Information

Item Value
gene id XLOC_020336
gene name hnrnpm
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 17531020 ~ 17544141 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040365
CCGCCATTTCAGCAGGCGAAGGACGAGAGTTGCGACTGAATTTTTTGTGCGGGTTTAGCGACACCTCACGGGACGGAAAAGCGACTGAACACCTACCTTTGTTTTTAACTATAAACGCGTGTTTATAAACCGCGTCTGAGGATCCACGAGCAGTTTAATCTGGAAGGAAGAAAACGCGGACATCTGAGAGCAAAATGTCGACTGAGGCTTCGCCAGAGAAAACAGGCCAAGGAAATGCAGTGAACGGCAAGTCCAACCATGAATCGAGAAAGGAAAGGCCCCCGAAGCGTGGTGGTGGGGGACGGTTCGAACCCTATTCGAACCCCAACAAGAGATACAGCGTGTTTGTCAGCAACATTCCCTATGATGTTAAATGGCAAACGCTGAAAGATCTCATGAAGGAAAAAGTGGGTGAGGTAACGTACGTGGAACACTTAATGGACGGAGAAGGCAAATCAAGGGGTTGTGCGGTGGTTGAGTTCAGAACTGAAGAGCTCATGAAAAAGGCTGTTGAAAAGGTCAACAAACATGTCATGAATGGCCGTCCTCTCAAGGTTAAGGAGGATCCAGATGGAGTGATTTCTCAGCGTGAAGCTAACCGGGGTCATGGTGGTGGCGGAGGTGGCGGTGGACCCCCAGGCATGGGAGGAGGCATGGGCGGTGGCATGGGAGGAGGCATGGGTGGTGGCATGGGAGGAGGCATGGGTGGTGGCATGGGCGGAGGCATGGGTGGAGGAATGGGCGGAGGCATGGGTGGAGGAATGGGCGGAGGAATGGGGATGGGCCCAGGACCTGGTTCTTCTTCAATGGTCAACATCCCTCCCAGTCTCATGAACAACCCTAACATTCCCAACGAGGTCATCCACGGCCTCCAAGCTGGAAAAATTGGAAGCACCATTTTTGTGgctaatttgGACTACAAAGTGGGATGGAAGAAACTGAAAGAGGTGTTCGGGATGGCCGGTATGGTCGTGCGTGCTGATATCCTGGAGGATAAAGATGGGAAAAGCAGAGGCATGGGAACGGTCACATTTGACATGCCTATTGAGGCTGTTCAGGCAGTCTCCATGTTTAATGGTCAGCTCCTCTTCAACCGGGTCATGCATGTCAAACTGGATGAGAAATCCCTTCCAAAAGGAGACTTTGCACCCCCAGAGCGTGCTCCAGCACTTCCTCGTGGTTTGAGCGGTGTTGGTCTTGGTCTGGGACCCGGCGGTCAACCCATTGATGCTACGCAGCTCAATCGTGGCGGGATGGGCAATATGGGGCCAGGAGGAATGGATGGAATGGGCTATGGTGGCATGGGTAGAATGGGAGGCATGGACAATTTTGGAGGCGGCGGCGGTGGTGGTGGCGGCATGAACAACATGGATCGTTTCGGACCTTCTGGAATGGGACGAATGAATGATATGGATCGTGGAATGGGTGGTGGCTTTGATCGAGATTTCAGTGGTCGTAATGACATGGGAATGTCCCGCAGCAACTTTGGAGACTCTTTTGATCGAGGAATGGGAAACTCCATGGGTATGGATCGCATGAATTCTGGCATGGATCGGCTTAGTGGTGGAATAGACCGTatgggaggaggaggaggaggtggaggaatGGACCGCATGGGAGggggaggaggaggtggaggaatGGACCGCATGTCTGATCTGGACCGCATGGGTTCTAGCTTTGATAGAATGGGGTCAGGGCTTGACCGTCTCGGCCCCAGCATGGATCGTATGGGTTCAGGCCTGGACCGCATGAGCACTAGCGTGGACCGTATGGGTCCTGGTGGCTTTGACCGCTTGGGCTCGTCCAGCATGGATCGTATGAGCGGTGGAATGGACTTTGCTTCTCCCATGGGCATGGACCGGATGAACACAGGTCTCGATCGAATGGGCTCAAACTTTGACCGCATGGGCTCTGGTGGCATGGACCGTTTCTCTTCGGGTCTGGACCGCATGGGCTCCAGCATGGATCGAATGGGATCTGGTGGCATCGGTGGCCAGTTTGACAGGCCCGGAGACATGGACCGTGGTAACTTTGGTTCTCCATTCGGCGGGTCTGGGCAAGGAGGAGGACCAGGGTCTGGTGGAGCCAATGCCAGGAAGGGCTGCCAGATTTTTGTCAGAAATCTGCCCTTTGACTTCACCTGGAAGATGTTGAAGGACACTTTTAATTCCTGTGGCATGGTTCAGTATGCAGATATAAAGATGGAGAACGGGAAGTCTAAGGGCTGTGGTGTGGTGCGCTTTGACAATCCTGAGACCGCTGAGCGAGCCTGTCGCACCATGAACGGCTACCGGCTCAACGGCAGAGAGATTGACGTCAGGATTGACAGAAATGCGTAATCCTACATTCTTTGCCTTCCATATTCGATTCCCTCCACCCCATACACTATGCTTTCCAGGTTATTTGTCAGTTACATATTTGTGCCAAATGGTACATTTTTAGGTTTATGACTTTTTAGagaccaaattttttttttttgcccacttTTTATTGTGATGCTTTCCAACAAATTGCCTTTGTTAAAGGTTTGCTAATAAATCTGTGTTGAGAACAGAA
>TCONS_00040366
CATTTCAGCAGGCGAAGGACGAGAGTTGCGACTGAATTTTTTGTGCGGGTTTAGCGACACCTCACGGGACGGAAAAGCGACTGAACACCTACCTTTGTTTTTAACTATAAACGCGTGTTTATAAACCGCGTCTGAGGATCCACGAGCAGTTTAATCTGGAAGGAAGAAAACGCGGACATCTGAGAGCAAAATGTCGACTGAGGCTTCGCCAGAGAAAACAGGCCAAGGAAATGCAGTGAACGGCAAGTCCAACCATGAATCGAGAAAGGAAAGGCCCCCGAAGCGTGGTGGTGGGGGACGGTTCGAACCCTATTCGAACCCCAACAAGAGATACAGCGTGTTTGTCAGCAACATTCCCTATGATGTTAAATGGCAAACGCTGAAAGATCTCATGAAGGAAAAAGGTACGCTTTTGTGCTGCATGGTTGTATCTCTCAGGACCCTTTTAGTTTTGAAGGTGGCCACCTTACACAGTTGCTTTAGGTCAGAGGACAAACATCCCATCATGGGGAAGTGGTCTCGGAGAAAGGCTGTTCTAATAGTGTCTTGAGGGGGAAAGGCTGTTGTTGAAACCGTCTAATTAAGTTTGCTAATGTGGGTGGATGGAACTTTAAAATTCTGTGTGCATTTGCACATGCATTAAGAACTTGAGATTAATCCATTCATATGAATCTGATTCCTGTAATCGGTCTCTACGGCTTTGGAGAAAGTGTGTAGTTTATTTACTATAACCTGTTGGTTAGTATTTCAGTAACAACCCATGAGTGGTCACATTTTTCCCAATCCTTGAGTTAGCACCCCCTCCATGCCTAATGATTTGTACGCATGGGGAATTTCATGTGGAAACTGTTGCTTGTAGAATTaaattgcattttctttttttaggttTGCCAGAGTGAATGTTGTTGCAGCAGATCTTCATTATTGTGcccattattataaaaaaa
>TCONS_00040367
ATGTCGACTGAGGCTTCGCCAGAGAAAACAGGCCAAGGAAATGCAGTGAACGGCAAGTCCAACCATGAATCGAGAAAGGAAAGGCCCCCGAAGCGTGGTGGTGGGGGACGGTTCGAACCCTATTCGAACCCCAACAAGAGATACAGCGTGTTTGTCAGCAACATTCCCTATGATGTTAAATGGCAAACGCTGAAAGATCTCATGAAGGAAAAAGTGGGTGAGGTAACGTACGTGGAACACTTAATGGACGGAGAAGGCAAATCAAGGGGTTGTGCGGTGGTTGAGTTCAGAACTGAAGAGCTCATGAAAAAGGCTGTTGAAAAGGTCAACAAACATGTCATGAATGGCCGTCCTCTCAAGGTTAAGGAGGATCCAGATGGAGTGATTTCTCAGCGTGAAGCTAACCGGGGTCATGGTGGTGGCGGAGGTGGCGGTGGACCCCCAGGCATGGGAGGAGGCATGGGCGGTGGCATGGGAGGAGGCATGGGTGGTGGCATGGGAGGAGGCATGGGTGGTGGCATGGGCGGAGGCATGGGTGGAGGAATGGGCGGAGGCATGGGTGGAGGAATGGGCGGAGGAATGGGGATGGGCCCAGGACCTGGTTCTTCTTCAATGGTCAACATCCCTCCCAGTCTCATGAACAACCCTAACATTCCCAACGAGGTCATCCACGGCCTCCAAGCTGGAAAAATTGGAAGCACCATTTTTGTGgctaatttgGACTACAAAGTGGGATGGAAGAAACTGAAAGAGGTGTTCGGGATGGCCGGTATGGTCGTGCGTGCTGATATCCTGGAGGATAAAGATGGGAAAAGCAGAGGCATGGGAACGGTCACATTTGACATGCCTATTGAGGCTGTTCAGGCAGTCTCCATGTTTAATGGTCAGCTCCTCTTCAACCGGGTCATGCATGTCAAACTGGATGAGAAATCCCTTCCAAAAGGAGACTTTGCACCCCCAGAGCGTGCTCCAGCACTTCCTCGTGGTTTGAGCGGTGTTGGTCTTGGTCTGGGACCCGGCGGTCAACCCATTGATGCTACGCAGCTCAATCGTGGCGGGATGGGCAATATGGGGCCAGGAGGAATGGATGGAATGGGCTATGGTGGCATGGGTAGAATGGGAGGCATGGACAATTTTGGAGGCGGCGGCGGTGGTGGTGGCGGCATGAACAACATGGATCGTTTCGGACCTTCTGGAATGGGACGAATGAATGATATGGATCGTGGAATGGGTGGTGGCTTTGATCGAGATTTCAGTGGTCGTAATGACATGGGAATGTCCCGCAGCAACTTTGGAGACTCTTTTGATCGAGGAATGGGAAACTCCATGGGTATGGATCGCATGAATTCTGGCATGGATCGGCTTAGTGGTGGAATAGACCGTatgggaggaggaggaggaggtggaggaatGGACCGCATGGGAGggggaggaggaggtggaggaatGGACCGCATGTCTGATCTGGACCGCATGGGTTCTAGCTTTGATAGAATGGGGTCAGGGCTTGACCGTCTCGGCCCCAGCATGGATCGTATGGGTTCAGGCCTGGACCGCATGAGCACTAGCGTGGACCGTATGGGTCCTGGTGGCTTTGACCGCTTGGGCTCGTCCAGCATGGATCGTATGAGCGGTGGAATGGACTTTGCTTCTCCCATGGGCATGGACCGGATGAACACAGGTCTCGATCGAATGGGCTCAAACTTTGACCGCATGGGCTCTGGTGGCATGGACCGTTTCTCTTCGGGTCTGGACCGCATGGGCTCCAGCATGGATCGAATGGGATCTGGTGGCATCGGTGGCCAGTTTGACAGGCCCGGAGACATGGACCGTGGTAACTTTGGTTCTCCATTCGGCGGGTCTGGGCAAGGAGGAGGACCAGGGTCTGGTGGAGCCAATGCCAGGAAGGGCTGCCAGATTTTTGTCAGAAATCTGCCCTTTGACTTCACCTGGAAGATGTTGAAGGACACTTTTAATTCCTGTGGCATGGTTCAGTATGCAGATATAAAGATGGAGAACGGGAAGTCTAAGGGCTGTGGTGTGGTGCGCTTTGACAATCCTGAGACCGCTGAGCGAGCCTGTCGCACCATGAACGGCTACCGGCTCAACGGCAGAGAGATTGACGTCAGGATTGACAGAAATGCATGACAGGACGATGAAGATGAAGCAGTTGCGGAAACATCTGACAGCAGCGTCCATCCGACATGATTCATCTGAAGAGTCCAAACCTTTAGCTGCCCTTCTCTCCTGAGGTCTGATTACTGTCGAGACATG
>TCONS_00040368
ATGTCGACTGAGGCTTCGCCAGAGAAAACAGGCCAAGGAAATGCAGTGAACGGCAAGTCCAACCATGAATCGAGAAAGGAAAGGCCCCCGAAGCGTGGTGGTGGGGGACGGTTCGAACCCTATTCGAACCCCAACAAGAGATACAGCGTGTTTGTCAGCAACATTCCCTATGATGTTAAATGGCAAACGCTGAAAGATCTCATGAAGGAAAAAGTGGGTGAGGTAACGTACGTGGAACACTTAATGGACGGAGAAGGCAAATCAAGGGGTTGTGCGGTGGTTGAGTTCAGAACTGAAGAGCTCATGAAAAAGGCTGTTGAAAAGGTCAACAAACATGTCATGAATGGCCGTCCTCTCAAGGTTAAGGAGGATCCAGATGGAGTGATTTCTCAGCGTGAAGCTAACCGGGGTCATGGTGGTGGCGGAGGTGGCGGTGGACCCCCAGGCATGGGAGGAGGCATGGGCGGTGGCATGGGAGGAGGCATGGGTGGTGGCATGGGAGGAGGCATGGGTGGTGGCATGGGCGGAGGCATGGGTGGAGGAATGGGCGGAGGCATGGGTGGAGGAATGGGCGGAGGAATGGGGATGGGCCCAGGACCTGGTTCTTCTTCAATGGTCAACATCCCTCCCAGTCTCATGAACAACCCTAACATTCCCAACGAGGTCATCCACGGCCTCCAAGCTGGAAAAATTGGAAGCACCATTTTTGTGgctaatttgGACTACAAAGTGGGATGGAAGAAACTGAAAGAGGTGTTCGGGATGGCCGGTATGGTCGTGCGTGCTGATATCCTGGAGGATAAAGATGGGAAAAGCAGAGGCATGGGAACGGTCACATTTGACATGCCTATTGAGGCTGTTCAGGCAGTCTCCATGTTTAATGGTCAGCTCCTCTTCAACCGGGTCATGCATGTCAAACTGGATGAGAAATCCCTTCCAAAAGGAGACTTTGCACCCCCAGAGCGTGCTCCAGCACTTCCTCGTGGTTTGAGCGGTGTTGGTCTTGGTCTGGGACCCGGCGGTCAACCCATTGATGCTACGCAGCTCAATCGTGGCGGGATGGGCAATATGGGGCCAGGAGGCATGGACAATTTTGGAGGCGGCGGCGGTGGTGGTGGCGGCATGAACAACATGGATCGTTTCGGACCTTCTGGAATGGGACGAATGAATGATATGGATCGTGGAATGGGTGGTGGCTTTGATCGAGATTTCAGTGGTCGTAATGACATGGGAATGTCCCGCAGCAACTTTGGAGACTCTTTTGATCGAGGAATGGGAAACTCCATGGGTATGGATCGCATGAATTCTGGCATGGATCGGCTTAGTGGTGGAATAGACCGTatgggaggaggaggaggaggtggaggaatGGACCGCATGGGAGggggaggaggaggtggaggaatGGACCGCATGTCTGATCTGGACCGCATGGGTTCTAGCTTTGATAGAATGGGGTCAGGGCTTGACCGTCTCGGCCCCAGCATGGATCGTATGGGTTCAGGCCTGGACCGCATGAGCACTAGCGTGGACCGTATGGGTCCTGGTGGCTTTGACCGCTTGGGCTCGTCCAGCATGGATCGTATGAGCGGTGGAATGGACTTTGCTTCTCCCATGGGCATGGACCGGATGAACACAGGTCTCGATCGAATGGGCTCAAACTTTGACCGCATGGGCTCTGGTGGCATGGACCGTTTCTCTTCGGGTCTGGACCGCATGGGCTCCAGCATGGATCGAATGGGATCTGGTGGCATCGGTGGCCAGTTTGACAGGCCCGGAGACATGGACCGTGGTAACTTTGGTTCTCCATTCGGCGGGTCTGGGCAAGGAGGAGGACCAGGGTCTGGTGGAGCCAATGCCAGGAAGGGCTGCCAGATTTTTGTCAGAAATCTGCCCTTTGACTTCACCTGGAAGATGTTGAAGGACACTTTTAATTCCTGTGGCATGGTTCAGTATGCAGATATAAAGATGGAGAACGGGAAGTCTAAGGGCTGTGGTGTGGTGCGCTTTGACAATCCTGAGACCGCTGAGCGAGCCTGTCGCACCATGAACGGCTACCGGCTCAACGGCAGAGAGATTGACGTCAGGATTGACAGAAATGCGTAATCCTACATTCTTTGCCTTCCATATTCGATTCCCTCCACCCCATACACTATGCTTTCCAGGTTATTTGTCAGTTACATATTTGTGCCAAATGGTACATTTTTAGGTTTATGACTTTTTAGagaccaaattttttttttttgcccacttTTTATTGTGATGCTTTCCAACAAATTGCCTTTGTTAAAGGTTTGCTAATAAATCTGTGTTGAGAACAGAAGCACTCTGTGTTGTGTGGTTCTCTTCAGATCACTAGACCCGGATATCTcatcactttaaaaacaaaagccAAGTGAATCAAGTTGTTTATTTGAAGGTTCTGAACAAAATGTACACACATCAGTCCATTGGTGGTGGTCTTCTTCATAGAGGTAACTGTCTATGCTGTACATCAATGCAAATACTCACATTTTGCCATGCTCTTTTGCTATCGAAGGGGGGCACAcagcttgtttttcttttgaccacacacatacacacaaaacagcTCAATTTTTGGAAGAGCAAGCGATTGATACAATTGTATGTCTGAGACGGTACAGACTTTACCATCCCAACTGAAGTTTACacgatacaaaaaaaaaaaaaccagctgGAAGAATGGGTGGGTTTCTGCAAGCCACTCGTGCGAAATAAACCCtcgaaaaacatttaaaatataatttatatgtatttaaatatctATATACAAATTCTCTAAGACACTATCATAGGGTGGGAGAAAGAGAGACTGAGTTGGTGAGTATTTTTCTAACTGTAGGTTGGCAAGAATATAAGGCAACTTAAATATGCGTGTGCTACACTTTACAGATATATTGCTGTAGTAGTCGCTTCAGATACGACAGCAATATCAAATAGCAACTGGCCACTGCACGTTATAAGAATCCGTGTCGCACATTTTCACACTCGcaaccacaaacacacacgcacagcctATACATGTTGATATACAACTGACCTTCAATATTTCTGTGGTGAAATGATTGCGATATTTGGCCTCCAACACAAGTTTGGTCCCGTCTTCCGATTTAACATGTCTCTGTAATTAGGTTCTGATGATATTAATGGATTTAGGTGCGTTATAAATAACTTATTTGGACAATGgaatgtatataaaaacaaaacgggtaaacatatatatattttaaaactatttcaatcCATTGTGGATCCtaatttctaaattaaaacgTGGAAAAATGGACTTTGGTTGTTGGTGAAAATCACACAATATACTTGTTGCACTTTCACCAAACTCAAACACTGCACACACTATTGCtggttctttttctttctttctgatgaaccaataaaaacaaaccaaattgtacaggattatatatatatataggtttacaTTTCACAATCCACTTTGTATTCTCTCAATTTCAACAAATTATTTCCTTTCATTTGAGTTAGTATTTCACctttttcttcagaattctgagtttaacTCTGTTCATACAGTCCAGACACACAGCTCCCAATTCTTAGGAAAATTTGAAAAAGCCAAAATTgcaagactttttatttttggcAATTCTGTttgtatcagatttttttttttctataaacgGTTTATATTCCACATATTGTGCAATATTGCATCTTTTAATCGTTTTCTCAGACCTGTGATACAAACTCGTAAAAGCAAAATTTCTGAGCTAAAATTGTGAGATACAAAGTTGCAAAACTTATACCAATAAGAATTGTGACCATTTCTCGCAattgcatttgattttttttttaaataaaaaaaaaaagatactgaATCGGAATTGCGACTACTCATAATTGCAGATTTACATTTCATGTTGcagttttaaaaaggaaaaaatagaaATCGACTTGAAATGTTTACAAGCTAAATATGGgaaatataaaattacaattctgAGGAAAAAAAGCCAATTtttggaaaacaaacaaaaaaaaaatctatttttagtgTCTCTCACTTATCTTTACAGTTCATTGATCAGAATTCTGTTTCTATCTACTTTTTCTATGAACTCTGAGTTCATCCTTCacaattttaaatagtttaccATAAACTGAGATAACTCCAGACCAGTCAGAATTGTTTCTTGTAATTTAGAGTTGACTTTCTCACAACTTGAAAATGAAATTGAACATGATGAAACATGAACATGAAATTGGATGTTTGTAAGTTGAAATCGCGAGATTCAAATTTGCAAAAGGAATTGCAACTATTTCTCTCCTCTGTGAGTTTACAGGGGTTTTCcccaatttgtacatttttatgaaaaatgctaaactttttacaaaacagtgacaaataATACAGTCAAACTTGTTTATTCCCAATTCCAAATATAATGCTTCTGCAAAACTGAATTTGCGAGAAATAGTCAGAATTCTGAGAGACACTTTTTTCAAACAAGCTTCCATAAAATCCCtccaaaacatattaaattagcaaaaactgcAACCTATTCATATGAACCGTCCGCCCATTTGCATCAGTGCGAatgaatttacaatttttttcaacaatttcgTAATGATGCCAAtaaccaaactaaaataaatacaaatacatttattttgtcaaCAAAACTCTCAGCCTacctccaaaataaaaaaaataaaaaaaatgccaaTGAGGAGAGGCTTGAGTCCCAGAACTTACTTGGATGAACACATTTCACagtacttaataaaataaaagaacagaACTTTTAACACAATCAAACAAAAACTTtcattattacttttaaatacCTCTATACAATGGCATTACCACTCGCTTGGTTCTGTTTGTGGAATAGATGACAGGACGATGAAGATGAAGCAGTTGCGGAAACATCTGACAGCAGCGTCCATCCGACATGATTCATCTGAAGAGTCCAAACCTTTAGCTGCCCTTCTCTCCTGAGGTCTGATTACTGTCGAGACATGGTAAAAAGGGTTGCTACCATCAACATCAAGGACTGTGAACTGAAGACGATCAATGACACAATGCACACTTACTGTTTCACTTTCCCCTTCATCCTCGGGCAGGGTTTTAGGCCCTGAGCTGAAATGCAGAGGAGAATAAACCCAGCTTTTGTCTTCTGGAGG
>TCONS_00040369
AACAACCCTAACATTCCCAACGAGGTCATCCACGGCCTCCAAGCTGGAAAAATTGGAAGCACCATTTTTGTGgctaatttgGACTACAAAGTGGGATGGAAGAAACTGAAAGAGGTGTTCGGGATGGCCGGTATGGTCGTGCGTGCTGATATCCTGGAGGATAAAGATGGGAAAAGCAGAGGCATGGGAACGGTCACATTTGACATGCCTATTGAGGCTGTTCAGGCAGTCTCCATGTTTAATGGTCAGCTCCTCTTCAACCGGGTCATGCATGTCAAACTGGATGAGAAATCCCTTCCAAAAGGAGACTTTGCACCCCCAGAGCGTGCTCCAGCACTTCCTCGTGGTTTGAGCGGTGTTGGTCTTGGTCTGGGACCCGGCGGTCAACCCATTGATGCTACGCAGCTCAATCGTGGCGGGATGGGCAATATGGGGCCAGGAGGCATGGACAATTTTGGAGGCGGCGGCGGTGGTGGTGGCGGCATGAACAACATGGATCGTTTCGGACCTTCTGGAATGGGACGAATGAATGATATGGATCGTGGAATGGGTGGTGGCTTTGATCGAGATTTCAGTGGTCGTAATGACATGGGAATGTCCCGCAGCAACTTTGGAGACTCTTTTGATCGAGGAATGGGAAACTCCATGGGTATGGATCGCATGAATTCTGGCATGGATCGGCTTAGTGGTGGAATAGACCGTa
>TCONS_00040370
ggaggtggaggaatGGACCGCATGTCTGATCTGGACCGCATGGGTTCTAGCTTTGATAGAATGGGGTCAGGGCTTGACCGTCTCGGCCCCAGCATGGATCGTATGGGTTCAGGCCTGGACCGCATGAGCACTAGCGTGGACCGTATGGGTCCTGGTGGCTTTGACCGCTTGGGCTCGTCCAGCATGGATCGTATGAGCGGTGGAATGGACTTTGCTTCTCCCATGGGCATGGACCGGATGAACACAGGTCTCGATCGAATGGGCTCAAACTTTGACCGCATGGGCTCTGGTGGCATGGACCGTTTCTCTTCGGGTCTGGACCGCATGGGCTCCAGCATGGATCGAATGGGATCTGGTGGCATCGGTGGCCAGTTTGACAGGCCCGGAGACATGGACCGTGGTAACTTTGGTTCTCCATTCGGCGGGTCTGGGCAAGGAGGAGGACCAGGGTCTGGTGGAGCCAATGCCAGGAAGGGCTGCCAGATTTTTGTCAGAAATCTGCCCTTTGACTTCACCTGGAAGATGTTGAAGGACACTTTTAATTCCTGTGGTGAGATGTCTTTCCAGTCCTACTAAACCCAGACTTCTATTCTGTCAACATTTGTAATGtattttctgtgtgtttttcCGTCCAGGCATGGTTCAGTATGCAGATATAAAGATGGAGAACGGGAAGTCTAAGGGCTGTGGTGTGGTGCGCTTTGACAATCCTGAGACCGCTGAGCGAGCCTGTCGCACCATGAACGGCTACCGGCTCAACGGCAGAGAGATTGACGTCAGGATTGACAGAAATGCG

Function

symbol description
hnrnpm Predicted to enable mRNA binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome and regulation of mRNA stability involved in response to oxidative stress. Predicted to act upstream of or within mRNA splicing, via spliceosome. Predicted to be part of post-mRNA release spliceosomal complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human HNRNPM (heterogeneous nuclear ribonucleoprotein M).

GO:

id name namespace
GO:0000380 alternative mRNA splicing, via spliceosome biological_process
GO:0000398 mRNA splicing, via spliceosome biological_process
GO:2000815 regulation of mRNA stability involved in response to oxidative stress biological_process
GO:0071014 post-mRNA release spliceosomal complex cellular_component
GO:1990904 ribonucleoprotein complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005737 cytoplasm cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0003723 RNA binding molecular_function
GO:0003729 mRNA binding molecular_function

KEGG:

id description
ko03040 Spliceosome
ko03041 Spliceosome

ZFIN:

id description
ZDB-GENE-030131-6898 Predicted to enable mRNA binding activity. Predicted to be involved in alternative mRNA splicing, via spliceosome and regulation of mRNA stability involved in response to oxidative stress. Predicted to act upstream of or within mRNA splicing, via spliceosome. Predicted to be part of post-mRNA release spliceosomal complex. Predicted to be active in cytoplasm and nucleus. Orthologous to human HNRNPM (heterogeneous nuclear ribonucleoprotein M).

Ensembl:

ensembl_id ENSDARG00000061735

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040365 False 2559 mRNA 0.52 16 17531020 17541277
TCONS_00040366 False 947 lncRNA 0.43 2 17531024 17534007
TCONS_00040367 False 2274 mRNA 0.54 17 17531214 17543979
TCONS_00040368 False 5187 mRNA 0.42 15 17531214 17544141
TCONS_00040369 False 703 mRNA 0.51 8 17536989 17539112
TCONS_00040370 True 796 lncRNA 0.54 2 17539163 17541057

Neighbor

gene id symbol gene type direction distance location
XLOC_020335 march2 coding upstream 9727 17509422 ~ 17521293 (+)
XLOC_020334 rab11ba coding upstream 24177 17499905 ~ 17506843 (+)
XLOC_020332 rabgap1l coding upstream 76563 17312111 ~ 17454457 (+)
XLOC_020333 gpr52 coding upstream 170562 17359346 ~ 17360458 (+)
XLOC_020331 FAM163A coding upstream 230403 17286841 ~ 17300617 (+)
XLOC_020337 polr2eb coding downstream 62447 17606588 ~ 17611582 (+)
XLOC_020338 tm6sf2 coding downstream 240273 17784414 ~ 17823608 (+)
XLOC_020339 BX908731.2 coding downstream 280318 17824459 ~ 17824573 (+)
XLOC_020340 hapln4 coding downstream 284126 17828267 ~ 17831253 (+)
XLOC_020341 nr2c2ap coding downstream 611859 18156000 ~ 18160269 (+)
XLOC_020324 NA non-coding upstream 719659 16810284 ~ 16811361 (+)
XLOC_020322 BX322568.1 non-coding upstream 891595 16639310 ~ 16639425 (+)
XLOC_020313 CR751228.1 non-coding upstream 1253395 16277498 ~ 16277625 (+)
XLOC_020308 BX323550.5 non-coding upstream 1593752 15787981 ~ 15937268 (+)
XLOC_020306 BX323550.1 non-coding upstream 1796177 15732967 ~ 15734843 (+)
XLOC_020344 NA non-coding downstream 699617 18243758 ~ 18304288 (+)
XLOC_020345 NA non-coding downstream 747333 18291474 ~ 18291797 (+)
XLOC_020351 NA non-coding downstream 1016202 18560343 ~ 18596258 (+)
XLOC_020360 BX927243.1 non-coding downstream 1692890 19237031 ~ 19238226 (+)

Expression


Co-expression Network