G89735


Basic Information

Item Value
gene id G89735
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79638891 ~ 79738568 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98787
ggcttcgtaagaagcatttcaaggtcctggagtggcctagccagtctccagatctcaaccccataaaaaatctttggagggaatagaaagtctgtgttgcccagcaacagccccaaaacatcactgctctagaggagatctgcatgggggaatgggccaaaataccagcaacagtgtgtgaaaaccttgtgaagacttacagaaaatggttgacctctgtcattgccaacaaaggg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98787 True 236 lncRNA 0.47 2 79638891 79738568

Neighbor

gene id symbol gene type direction distance location
LOC110530152 LOC106577111 coding upstream 72322 79563587 ~ 79566569 (+)
rtn4 rtn4 coding upstream 381398 79229666 ~ 79257493 (+)
LOC110530093 clhc1 coding upstream 417106 79212555 ~ 79221785 (+)
LOC110530085 ccdc88a coding upstream 431491 79126805 ~ 79207400 (+)
cfap36 cfap36 coding upstream 558351 79057668 ~ 79080540 (+)
bcl2l11 bcl2l11 coding downstream 27665 79766233 ~ 79782247 (+)
vip LOC106577104 coding downstream 186128 79924696 ~ 79928909 (+)
slc29a1a LOC106577101 coding downstream 217766 79956334 ~ 80033777 (+)
arhgef33 LOC106577154 coding downstream 509531 80248099 ~ 80267460 (+)
LOC110530346 LOC106577158 coding downstream 621248 80359816 ~ 80364026 (+)
G89710 NA non-coding upstream 27231 79611361 ~ 79611660 (+)
G89709 NA non-coding upstream 27618 79611019 ~ 79611273 (+)
G89708 NA non-coding upstream 28137 79610307 ~ 79610754 (+)
G89703 NA non-coding upstream 32252 79606430 ~ 79606639 (+)
G89702 NA non-coding upstream 33184 79605489 ~ 79605707 (+)
G89865 NA non-coding downstream 108539 79847107 ~ 79852264 (+)
G89889 NA non-coding downstream 146998 79885566 ~ 79974525 (+)
G89891 NA non-coding downstream 148111 79886679 ~ 79890045 (+)
G89893 NA non-coding downstream 150015 79888583 ~ 79891743 (+)
G89667 NA other upstream 89240 79549017 ~ 79549651 (+)
G87159 NA other upstream 2068421 77570015 ~ 77570470 (+)
G86614 NA other upstream 2514464 77123935 ~ 77124427 (+)
G86019 NA other upstream 3002955 76631745 ~ 76635936 (+)
LOC110529610 NA other upstream 3179068 76457821 ~ 76459823 (+)
acoxl acoxl other downstream 13205 79720751 ~ 79765359 (+)
G91064 NA other downstream 1026546 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 1799763 81538331 ~ 81541400 (+)
G91779 NA other downstream 2138971 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 2167564 81906132 ~ 81907399 (+)

Expression


Co-expression Network