XLOC_020339 (BX908731.2)


Basic Information

Item Value
gene id XLOC_020339
gene name BX908731.2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 17824459 ~ 17824573 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040377
GCCGGcagttagctctctgcaactctcacatgatcgcccactgaagctaagcaaagCTGCGCCTGGTCACTACGTGGATGGgacaccacatgggaaagctaggttgccgCCGGAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000111487

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040377 True 115 rRNA 0.57 1 17824459 17824573

Neighbor

gene id symbol gene type direction distance location
XLOC_020338 tm6sf2 coding upstream 851 17784414 ~ 17823608 (+)
XLOC_020337 polr2eb coding upstream 212877 17606588 ~ 17611582 (+)
XLOC_020336 hnrnpm coding upstream 280318 17531020 ~ 17544141 (+)
XLOC_020335 march2 coding upstream 303166 17509422 ~ 17521293 (+)
XLOC_020334 rab11ba coding upstream 317616 17499905 ~ 17506843 (+)
XLOC_020340 hapln4 coding downstream 3694 17828267 ~ 17831253 (+)
XLOC_020341 nr2c2ap coding downstream 331427 18156000 ~ 18160269 (+)
XLOC_020342 borcs8 coding downstream 342026 18166599 ~ 18175378 (+)
XLOC_020343 mef2b coding downstream 363284 18187857 ~ 18216488 (+)
XLOC_020344 NA coding downstream 419185 18243758 ~ 18304288 (+)
XLOC_020324 NA non-coding upstream 1013098 16810284 ~ 16811361 (+)
XLOC_020322 BX322568.1 non-coding upstream 1185034 16639310 ~ 16639425 (+)
XLOC_020313 CR751228.1 non-coding upstream 1546834 16277498 ~ 16277625 (+)
XLOC_020308 BX323550.5 non-coding upstream 1887191 15787981 ~ 15937268 (+)
XLOC_020306 BX323550.1 non-coding upstream 2089616 15732967 ~ 15734843 (+)
XLOC_020345 NA non-coding downstream 466901 18291474 ~ 18291797 (+)
XLOC_020351 NA non-coding downstream 735770 18560343 ~ 18596258 (+)
XLOC_020360 BX927243.1 non-coding downstream 1412458 19237031 ~ 19238226 (+)
XLOC_020380 BX510913.2 non-coding downstream 1947125 19771698 ~ 19771812 (+)

Expression


Co-expression Network