G89891


Basic Information

Item Value
gene id G89891
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79886679 ~ 79890045 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU98970
gtgtttgtgcatgactgactgtgtgtgtgtgtgtgtgtgcatgactgactgtgtgtgtgcgtgtgtctgattgtgtatgtctgactgcgtgtgtgtctgactgtgtgtgtgtgtgtgtgggtgtgtgactgactgtgtgtgtgaatgactgtgtgtgtatgtgtgtgtgtgtctgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagactgactgtgtgtgtgtgactgactgactgactgtgtgtgactgactgactgtgtgtgactgactgactgactgtgtgtgtgtgtgcatgactgactgtgtgtgtgtgtgtgtgcatgactgactgtgtgtgtgcgtgtgtctgattgtgtatgtgtctgactgtgtgtgtgtctgactgtgtgtgtgtgtgtgtgtgtgtctgactgtgtgtgtgcgtgcgtgtgactgACTGTGTTTGCGTTCGTgtatctgactgactgtgtgctactgactgactgtgtgtctgtgtgtgtctgactgtgtctgactgactgtgtgtgtgcgtgtatctgCCTGActgggtgtgtgcgtgtctgactgactgggtgtatgtgtgtgtgcgtgcgtgcgtgtctgactgactgtgtgtgtgtttgcgtgcgtgcgcgtgcgtctgtctgactgtgtgtgtgtgtgcgtttatcTGCCTGaatgggtgtgtgcgtgcgtgtgtgtgtgtgcgtgcgtgtctgactgactgtgtgtgtgcgtgactgactgagtgtgtgtgtgcgtgtctgactgtgtgtgtgactgactgtgtgtctgagtgtgtgtgtgtgtgtgtgtgcgtgcgtctgactgagtgtgtgcgtgcgtgtctgactgtgtgtgtgactgactgtgtgtctgagtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgactgactgtgtgtgtctgcctgtctgtttgtccgTCTGCCTGTGAGTATCTACCTGactgtgagtgtctgtctgactgtgtgcgtgtgtatctgactgactgactgagtgtgaatgtgtgtgtgtgactgactgactgtgtgcttgtctgactgactgtgtgtgtgtgtgtgtgtgtgactgactgactgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU98970 True 1238 lncRNA 0.52 2 79886679 79890045

Neighbor

gene id symbol gene type direction distance location
bcl2l11 bcl2l11 coding upstream 104432 79766233 ~ 79782247 (+)
acoxl acoxl coding upstream 121320 79720751 ~ 79765359 (+)
LOC110530167 st6b1 coding upstream 168733 79708170 ~ 79717946 (+)
LOC110530152 LOC106577111 coding upstream 320110 79563587 ~ 79566569 (+)
rtn4 rtn4 coding upstream 629186 79229666 ~ 79257493 (+)
vip LOC106577104 coding downstream 34651 79924696 ~ 79928909 (+)
slc29a1a LOC106577101 coding downstream 66289 79956334 ~ 80033777 (+)
arhgef33 LOC106577154 coding downstream 358054 80248099 ~ 80267460 (+)
LOC110530346 LOC106577158 coding downstream 469771 80359816 ~ 80364026 (+)
LOC110530352 LOC106577159 coding downstream 493521 80383566 ~ 80386413 (+)
G89865 NA non-coding upstream 34415 79847107 ~ 79852264 (+)
G89735 NA non-coding upstream 148111 79638891 ~ 79738568 (+)
G89766 NA non-coding upstream 156913 79656049 ~ 79729766 (+)
G89710 NA non-coding upstream 275019 79611361 ~ 79611660 (+)
G89973 NA non-coding downstream 130656 80020701 ~ 80020988 (+)
G89984 LOC106577100 non-coding downstream 162905 80052950 ~ 80058335 (+)
G90055 NA non-coding downstream 287559 80177604 ~ 80178075 (+)
G90446 NA non-coding downstream 327667 80217712 ~ 80218052 (+)
G89667 NA other upstream 337028 79549017 ~ 79549651 (+)
G87159 NA other upstream 2316209 77570015 ~ 77570470 (+)
G86614 NA other upstream 2762252 77123935 ~ 77124427 (+)
G86019 NA other upstream 3250743 76631745 ~ 76635936 (+)
G91064 NA other downstream 875069 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 1648286 81538331 ~ 81541400 (+)
G91779 NA other downstream 1987494 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 2016087 81906132 ~ 81907399 (+)
LOC110530572 LOC106577202 other downstream 2238599 82128619 ~ 82163498 (+)

Expression


Co-expression Network