G90291


Basic Information

Item Value
gene id G90291
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 79961190 ~ 79989614 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU99445
gtgatttattatcttttttttttttcatcacattcccagtgggtcagaagtttacatacactcaattagtatttggtagcattgcctttaaactgtttaactatggtcaaatgtttcgggtagccttccacaagcttcccacaataagttgggtgaattttggtccattcctcctgacagagctgatataaccgagtcaggtttgtaggcctccttgctcgcatacactttttcagttctgcccacaaattctctataggattgaggtcagggctttgtgatggccactccactaccttgactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcgttgtccatttggaagacccatttgcgaccaagctttaacttcctgaatgatgtcttgagatgttacttcaatatgtccacattattttcctggctcatgatgccatctattttgtgaagagtaCCAGTCCGTCCTGAAGCAAAGCACAACCAAAAGATGGCTACCAATAccaaccctgtgcttcacggttaggatgatGTTCATCGGCTTGAaagccaccccctttttcctccaaacataacgatggccattatggcaaaacaattcaatttttgtttcatcagaccagaggacatttctccaaaaagtaggatctttgtccccatgtgctttgcaaaccgtagtctggctttttttatggtggttttgaagcagtggcttcttccttgctgagtggggtttcagcttatgtcgatataggactcgttttactgtagaaatatatacttttgtacccgtttcctccagcatcttcacaaggacctttgctgttgttctgggattgatttgcactttttgcaccaaagtacgttcatatctaggagacagaacacgtctccttcctgagcggtatgaaggctgcgtggtcccatggtgtttatacttgcgtactactgtttgatttcccatgacgtcaagcaaagagacactgagtttgaaggtaggccttgaaatacatccacaggtacacctccaattgactcaaattatgtcaattagcctatcaaaagcttctaaagccatgacataattttctggaattttccaagcaatTCTCCAagcaggcacagtcaacttagtgtatgtaaacttctgactcactggaattgtgatacagtgaattataagtgaaataatctgtctgtaaacaattgttggaaaaattacttgtgtcatgcacaaagtagatgtcctaaccgactttccaaaaatatagtttgttcacaagaaatttgtggagtggttgaaaaacgagttttaatgactccaactaagtgtatgtaaacttccgacttcaactgtatatcctagTCTACTTCTTTCAGGTAATACATTGTATGCAGTAGGCCTACTAGCCTTTAGTTCATGAATGATGGGTTATGCATAAGCTTCTAACTTATAGCTTTTGTCTCTTGCGTATTACACACCTGCACTCTGCTGGCCTCTCTCCTTAAAAAAAActccttagctcttggagtcccagGAAAAGCTAGATGAGATTAGCTTGctgggaatttttttttttattgtttcttATACTAATAGACTATTGGACGAGTGATCCAATCTCTTGATTGCTGACTGTTACATACATTAGCCAATAGAAGTCACAGGGAGTTTGAAAGACTCGTTTGACCATAGCAGTTATTTAATCCTATAACTGTTCAATCTTCGTTAAGATCATTTTGGGCTGTTTTGGGCTTGGGATTAAAAAaagtctttaatgtagggctcataaaatatctttaatgtagggctcataaaaagtctttaatgtatggctcatcaggctcaggtagcatcagggtTGAATTTTCATGCCAATCATTGCTCTAATCAAATCCaggcatttacagtgcctttcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtattttttgtgaagaatcaacaacaagt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99445 True 2041 lncRNA 0.54 3 79961190 79989614

Neighbor

gene id symbol gene type direction distance location
mtrf1l mtrf1l coding downstream 14254 79935822 ~ 79946936 (-)
LOC110530200 NA coding downstream 43315 79862081 ~ 79917875 (-)
LOC100136270 LOC106577110 coding downstream 268611 79612637 ~ 79692579 (-)
LOC110530138 LOC100380625 coding downstream 466020 79361597 ~ 79495170 (-)
LOC110530112 LOC106577113 coding downstream 609786 79257290 ~ 79351404 (-)
LOC110530250 LOC106577100 coding upstream 45672 80035286 ~ 80058352 (-)
LOC110530258 LOC106577097 coding upstream 82956 80072570 ~ 80138452 (-)
LOC110530266 LOC106577153 coding upstream 231402 80221016 ~ 80236430 (-)
LOC110530293 LOC106577155 coding upstream 277026 80266640 ~ 80349843 (-)
thumpd2 thumpd2 coding upstream 374413 80364027 ~ 80376924 (-)
G90260 LOC106577104 non-coding downstream 32285 79926215 ~ 79928905 (-)
G90205 NA non-coding downstream 222508 79677856 ~ 79738682 (-)
G90137 NA non-coding downstream 355910 79605007 ~ 79605280 (-)
G90132 NA non-coding downstream 362717 79598110 ~ 79598473 (-)
G90271 NA non-coding upstream 164217 80153831 ~ 80157631 (-)
G90406 NA non-coding upstream 195527 80185141 ~ 80185438 (-)
G90409 NA non-coding upstream 196862 80186476 ~ 80186781 (-)
G90429 NA non-coding upstream 214678 80204292 ~ 80204504 (-)
G90439 NA non-coding upstream 221395 80211009 ~ 80211228 (-)
G90190 NA other downstream 73010 79886675 ~ 79888180 (-)
G90081 NA other downstream 425618 79534758 ~ 79535572 (-)
G89418 NA other downstream 910699 79049811 ~ 79050491 (-)
G87090 NA other downstream 2481251 77478603 ~ 77479939 (-)
G90382 NA other upstream 151945 80141559 ~ 80142157 (-)
nphp1 LOC106577164 other upstream 951110 80940215 ~ 80966643 (-)
G91941 NA other upstream 1038294 81027908 ~ 81028612 (-)
G91943 LOC106577167 other upstream 1041218 81030832 ~ 81031358 (-)
G91947 NA other upstream 1045961 81035575 ~ 81036138 (-)

Expression


Co-expression Network