Gene
RNA
| Item | Value |
|---|---|
| gene id | G90409 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 80186476 ~ 80186781 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU99572 | True | 306 | lncRNA | 0.38 | 1 | 80186476 | 80186781 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530258 | LOC106577097 | coding | downstream | 48024 | 80072570 ~ 80138452 (-) |
| LOC110530250 | LOC106577100 | coding | downstream | 128124 | 80035286 ~ 80058352 (-) |
| mtrf1l | mtrf1l | coding | downstream | 239540 | 79935822 ~ 79946936 (-) |
| LOC110530200 | NA | coding | downstream | 268601 | 79862081 ~ 79917875 (-) |
| LOC100136270 | LOC106577110 | coding | downstream | 493897 | 79612637 ~ 79692579 (-) |
| LOC110530266 | LOC106577153 | coding | upstream | 34235 | 80221016 ~ 80236430 (-) |
| LOC110530293 | LOC106577155 | coding | upstream | 79859 | 80266640 ~ 80349843 (-) |
| thumpd2 | thumpd2 | coding | upstream | 177246 | 80364027 ~ 80376924 (-) |
| slc8a1b | LOC106577160 | coding | upstream | 222696 | 80409477 ~ 80647140 (-) |
| LOC110530369 | LOC106577163 | coding | upstream | 716556 | 80903337 ~ 80905779 (-) |
| G90406 | NA | non-coding | downstream | 1038 | 80185141 ~ 80185438 (-) |
| G90271 | NA | non-coding | downstream | 28845 | 80153831 ~ 80157631 (-) |
| G90291 | NA | non-coding | downstream | 196862 | 79961190 ~ 79989614 (-) |
| G90260 | LOC106577104 | non-coding | downstream | 257571 | 79926215 ~ 79928905 (-) |
| G90429 | NA | non-coding | upstream | 17511 | 80204292 ~ 80204504 (-) |
| G90439 | NA | non-coding | upstream | 24228 | 80211009 ~ 80211228 (-) |
| G90443 | NA | non-coding | upstream | 28018 | 80214799 ~ 80215568 (-) |
| G90744 | NA | non-coding | upstream | 50003 | 80236784 ~ 80237768 (-) |
| G90798 | NA | non-coding | upstream | 169127 | 80355908 ~ 80356132 (-) |
| G90382 | NA | other | downstream | 44319 | 80141559 ~ 80142157 (-) |
| G90190 | NA | other | downstream | 298296 | 79886675 ~ 79888180 (-) |
| G90081 | NA | other | downstream | 650904 | 79534758 ~ 79535572 (-) |
| G89418 | NA | other | downstream | 1135985 | 79049811 ~ 79050491 (-) |
| nphp1 | LOC106577164 | other | upstream | 753943 | 80940215 ~ 80966643 (-) |
| G91941 | NA | other | upstream | 841127 | 81027908 ~ 81028612 (-) |
| G91943 | LOC106577167 | other | upstream | 844051 | 81030832 ~ 81031358 (-) |
| G91947 | NA | other | upstream | 848794 | 81035575 ~ 81036138 (-) |
| LOC110532756 | LOC106577174 | other | upstream | 994043 | 81175845 ~ 81449471 (-) |
