G90527


Basic Information

Item Value
gene id G90527
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 80355319 ~ 80355724 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU99717
acagtaaaaagacaggctatatactgtagcgaGGCTTTAAAAGTAGCGAGGCTTCATACaaacaccggttagtcaggctgattgaggtagtatgtacagtggggagaacaagtatttgatacactgacgattttgcaggttttcctacttacaaagcatgtagaggtctgtaatttttttatcataggtacacttcaactgtgagatacggaatctaaaacaaaaattcagaaaatcacatcgtATGTTTTTAAAGTAATTCATTAGCATTTTCCTGCATGACattagtatttgatcacctaccaaccagtaagaattccggctctcacagacctgttagtttttctttaagaagccctcctgttctccactcattacctgtattaactgcacctgtttgagcTTG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99717 True 406 lncRNA 0.45 1 80355319 80355724

Neighbor

gene id symbol gene type direction distance location
arhgef33 LOC106577154 coding upstream 91585 80248099 ~ 80267460 (+)
slc29a1a LOC106577101 coding upstream 321542 79956334 ~ 80033777 (+)
vip LOC106577104 coding upstream 426410 79924696 ~ 79928909 (+)
bcl2l11 bcl2l11 coding upstream 573072 79766233 ~ 79782247 (+)
acoxl acoxl coding upstream 589960 79720751 ~ 79765359 (+)
LOC110530346 LOC106577158 coding downstream 4092 80359816 ~ 80364026 (+)
LOC110530352 LOC106577159 coding downstream 27842 80383566 ~ 80386413 (+)
LOC110532748 LOC106577167 coding downstream 658981 81014705 ~ 81056605 (+)
LOC110530417 LOC106577168 coding downstream 701271 81056995 ~ 81078956 (+)
zcchc24 LOC106577169 coding downstream 728310 81084034 ~ 81175099 (+)
G90446 NA non-coding upstream 137267 80217712 ~ 80218052 (+)
G90055 NA non-coding upstream 177244 80177604 ~ 80178075 (+)
G89984 LOC106577100 non-coding upstream 296984 80052950 ~ 80058335 (+)
G89973 NA non-coding upstream 334331 80020701 ~ 80020988 (+)
G90528 NA non-coding downstream 1655 80357379 ~ 80357600 (+)
G90542 NA non-coding downstream 47791 80403515 ~ 80408049 (+)
G90556 NA non-coding downstream 81158 80436882 ~ 80439031 (+)
G90671 NA non-coding downstream 298181 80653905 ~ 80757902 (+)
G90724 NA non-coding downstream 372799 80728523 ~ 80754315 (+)
G89667 NA other upstream 805668 79549017 ~ 79549651 (+)
G87159 NA other upstream 2784849 77570015 ~ 77570470 (+)
G86614 NA other upstream 3230892 77123935 ~ 77124427 (+)
G86019 NA other upstream 3719383 76631745 ~ 76635936 (+)
G91064 NA other downstream 409390 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 1182607 81538331 ~ 81541400 (+)
G91779 NA other downstream 1521815 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 1550408 81906132 ~ 81907399 (+)
LOC110530572 LOC106577202 other downstream 1772920 82128619 ~ 82163498 (+)

Expression


Co-expression Network