Gene
RNA
| Item | Value |
|---|---|
| gene id | G90839 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 80425183 ~ 80426740 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU100063 | True | 285 | lncRNA | 0.40 | 2 | 80425183 | 80426740 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| thumpd2 | thumpd2 | coding | downstream | 48259 | 80364027 ~ 80376924 (-) |
| LOC110530293 | LOC106577155 | coding | downstream | 75340 | 80266640 ~ 80349843 (-) |
| LOC110530266 | LOC106577153 | coding | downstream | 188753 | 80221016 ~ 80236430 (-) |
| LOC110530258 | LOC106577097 | coding | downstream | 286731 | 80072570 ~ 80138452 (-) |
| LOC110530250 | LOC106577100 | coding | downstream | 366831 | 80035286 ~ 80058352 (-) |
| LOC110530369 | LOC106577163 | coding | upstream | 476597 | 80903337 ~ 80905779 (-) |
| LOC118965579 | LOC106577163 | coding | upstream | 493208 | 80919948 ~ 80922357 (-) |
| nphp1 | LOC106577164 | coding | upstream | 513475 | 80940215 ~ 80966643 (-) |
| LOC110530390 | LOC106577181 | coding | upstream | 549252 | 80975992 ~ 80991714 (-) |
| ppifa | LOC106577170 | coding | upstream | 742062 | 81168802 ~ 81174063 (-) |
| G90799 | NA | non-coding | downstream | 68826 | 80356137 ~ 80356357 (-) |
| G90798 | NA | non-coding | downstream | 69051 | 80355908 ~ 80356132 (-) |
| G90744 | NA | non-coding | downstream | 187415 | 80236784 ~ 80237768 (-) |
| G90443 | NA | non-coding | downstream | 209615 | 80214799 ~ 80215568 (-) |
| G90439 | NA | non-coding | downstream | 213955 | 80211009 ~ 80211228 (-) |
| G90847 | NA | non-coding | upstream | 20191 | 80446931 ~ 80447829 (-) |
| G90994 | NA | non-coding | upstream | 237628 | 80664368 ~ 80754269 (-) |
| G91031 | NA | non-coding | upstream | 300560 | 80727300 ~ 80727679 (-) |
| G91067 | NA | non-coding | upstream | 340817 | 80767557 ~ 80768021 (-) |
| G91101 | NA | non-coding | upstream | 368528 | 80795268 ~ 80795504 (-) |
| G90382 | NA | other | downstream | 283026 | 80141559 ~ 80142157 (-) |
| LOC110530200 | NA | other | downstream | 527343 | 79862081 ~ 79917875 (-) |
| G90190 | NA | other | downstream | 537003 | 79886675 ~ 79888180 (-) |
| G90081 | NA | other | downstream | 889611 | 79534758 ~ 79535572 (-) |
| G89418 | NA | other | downstream | 1374692 | 79049811 ~ 79050491 (-) |
| G91941 | NA | other | upstream | 601168 | 81027908 ~ 81028612 (-) |
| G91943 | LOC106577167 | other | upstream | 604092 | 81030832 ~ 81031358 (-) |
| G91947 | NA | other | upstream | 608835 | 81035575 ~ 81036138 (-) |
| LOC110532756 | LOC106577174 | other | upstream | 754084 | 81175845 ~ 81449471 (-) |
