G90671


Basic Information

Item Value
gene id G90671
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 80653905 ~ 80757902 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU99870
gcccccttaagttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcagttttgcacatcgagagactgacattttttcccattcctccttgcaaaacagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattgaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgccccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcgggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccaaaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttt

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU99870 True 643 lncRNA 0.44 2 80653905 80757902

Neighbor

gene id symbol gene type direction distance location
LOC110530352 LOC106577159 coding upstream 267492 80383566 ~ 80386413 (+)
LOC110530346 LOC106577158 coding upstream 289879 80359816 ~ 80364026 (+)
arhgef33 LOC106577154 coding upstream 390171 80248099 ~ 80267460 (+)
slc29a1a LOC106577101 coding upstream 620128 79956334 ~ 80033777 (+)
vip LOC106577104 coding upstream 724996 79924696 ~ 79928909 (+)
LOC110532748 LOC106577167 coding downstream 256803 81014705 ~ 81056605 (+)
LOC110530417 LOC106577168 coding downstream 299093 81056995 ~ 81078956 (+)
zcchc24 LOC106577169 coding downstream 326132 81084034 ~ 81175099 (+)
LOC118966718 NA coding downstream 573644 81331546 ~ 81332112 (+)
ipyr ipyr coding downstream 862318 81620220 ~ 81635022 (+)
G90556 NA non-coding upstream 214874 80436882 ~ 80439031 (+)
G90542 NA non-coding upstream 245856 80403515 ~ 80408049 (+)
G90528 NA non-coding upstream 296305 80357379 ~ 80357600 (+)
G90527 NA non-coding upstream 298181 80355319 ~ 80355724 (+)
G91051 NA non-coding downstream 93 80757995 ~ 80758220 (+)
G91068 NA non-coding downstream 10970 80768872 ~ 80769195 (+)
G91126 NA non-coding downstream 52952 80810854 ~ 80811062 (+)
G91189 NA non-coding downstream 98296 80856198 ~ 80856883 (+)
G91196 NA non-coding downstream 103437 80861339 ~ 80861639 (+)
acoxl acoxl other upstream 888546 79720751 ~ 79765359 (+)
G89667 NA other upstream 1104254 79549017 ~ 79549651 (+)
G87159 NA other upstream 3083435 77570015 ~ 77570470 (+)
G86614 NA other upstream 3529478 77123935 ~ 77124427 (+)
G86019 NA other upstream 4017969 76631745 ~ 76635936 (+)
G91064 NA other downstream 7212 80765114 ~ 80766155 (+)
G91541 LOC106591086 other downstream 780429 81538331 ~ 81541400 (+)
G91779 NA other downstream 1119637 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 1148230 81906132 ~ 81907399 (+)
LOC110530572 LOC106577202 other downstream 1370742 82128619 ~ 82163498 (+)

Expression


Co-expression Network