G91254


Basic Information

Item Value
gene id G91254
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 80941214 ~ 80943032 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU100497
CTTTTCAGATCTCTTCATATTGCTCTCAGCCTCCAACCAAGACTTCTGAACAGAAAAACAATTCAGTCAGGGGGATGATGCAACATTATAGTAAATACACTGTAGCTAGCCAATAAGTCTGTAAAAGAGCCCACTGATTCCTGAAAATAGGGTCTGAATTGCATTGGGTTATCAGGGGGTGGGGAGATGAGCTAGCCTCGATCCGGCAACGGAATTTACCCTCAGGGCATCCAGCAGGTCCGATTGGTCCATGATCTCTGGGAAGGTGGCCAGCAGAGGACTACAGATCAGATCTGTTGGGGAGTGACATCGGCCCGACATAATTCCTCATTAGTGACAAACAGCTACTGCAACACATACTGTACTACCGTAGGAAAAGCAGTCTGGTCTTCTCTGTATCTGATCATcagcacaggtgaaacagggGCAACACCAATCTGACAAGATTACCTTCCTGGGCCCGGTtccccaaaagcatcttaaggctaaattCATTGTTAGAACCTTCATAGGAGCATTGTTAAATCTCTGATCTGTTTCCCAAAACCTTCGTTACTAAAGTTGAACTTGAAAACGCTTGTCATTTACcaactgcctcagaccactcgcaGAACAGCTAAGTGTCACTATATACACTGCTCTTAAGTGGCGCAGAAGTCTAAGGCAcgacatcgcagtgctagaggcgtcactacagaccctggtttgatcccggactgtatcacaaccggccttgaTCGGGAGTCCCCCATAGggtagcgcacaattggcccagcatcctccgggttaggggagggttttgccggagtaggccgtcattgtaagtaaaaatttgttcttaactgacttgcctagttaaataaaggttaaataaaatagtgtgtttaacaggtgacatcaataagggatcttatctttcacctggattcacctggtcagtctgtcatggaaagagttcttaatgttttgtacgcaACGTAGAATCAAgatgtttatttttaaatgttttatttcacctttatttaaccatgtaggctggttgagaacaagttctcatttacacctgcgacctggccaagataaagcaaagcagtgtgaaacaaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100497 True 1105 lncRNA 0.45 2 80941214 80943032

Neighbor

gene id symbol gene type direction distance location
LOC110530352 LOC106577159 coding upstream 554801 80383566 ~ 80386413 (+)
LOC110530346 LOC106577158 coding upstream 577188 80359816 ~ 80364026 (+)
arhgef33 LOC106577154 coding upstream 677480 80248099 ~ 80267460 (+)
slc29a1a LOC106577101 coding upstream 907437 79956334 ~ 80033777 (+)
vip LOC106577104 coding upstream 1012305 79924696 ~ 79928909 (+)
LOC110532748 LOC106577167 coding downstream 71673 81014705 ~ 81056605 (+)
LOC110530417 LOC106577168 coding downstream 113963 81056995 ~ 81078956 (+)
zcchc24 LOC106577169 coding downstream 141002 81084034 ~ 81175099 (+)
LOC118966718 NA coding downstream 388514 81331546 ~ 81332112 (+)
ipyr ipyr coding downstream 677188 81620220 ~ 81635022 (+)
G91213 NA non-coding upstream 65249 80875734 ~ 80875965 (+)
G91196 NA non-coding upstream 79575 80861339 ~ 80861639 (+)
G91189 NA non-coding upstream 84331 80856198 ~ 80856883 (+)
G91126 NA non-coding upstream 130152 80810854 ~ 80811062 (+)
G91068 NA non-coding upstream 172019 80768872 ~ 80769195 (+)
G91293 NA non-coding downstream 66462 81009494 ~ 81009841 (+)
G91300 NA non-coding downstream 72069 81015101 ~ 81015309 (+)
G91297 NA non-coding downstream 73104 81016136 ~ 81016407 (+)
G91302 NA non-coding downstream 77864 81020896 ~ 81021105 (+)
G91303 NA non-coding downstream 78366 81021398 ~ 81021686 (+)
G91064 NA other upstream 175059 80765114 ~ 80766155 (+)
acoxl acoxl other upstream 1175855 79720751 ~ 79765359 (+)
G89667 NA other upstream 1391563 79549017 ~ 79549651 (+)
G87159 NA other upstream 3370744 77570015 ~ 77570470 (+)
G86614 NA other upstream 3816787 77123935 ~ 77124427 (+)
G91541 LOC106591086 other downstream 595299 81538331 ~ 81541400 (+)
G91779 NA other downstream 934507 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 963100 81906132 ~ 81907399 (+)
LOC110530572 LOC106577202 other downstream 1185612 82128619 ~ 82163498 (+)
G92511 NA other downstream 1199092 82142124 ~ 82142587 (+)

Expression


Co-expression Network