Gene
RNA
| Item | Value |
|---|---|
| gene id | G91942 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048565.1 |
| NCBI id | CM023219.2 |
| chromosome length | 95772356 |
| location | 81028674 ~ 81029019 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tau-tubulin kinase 1-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU101250 | True | 346 | lncRNA | 0.54 | 1 | 81028674 | 81029019 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530390 | LOC106577181 | coding | downstream | 36960 | 80975992 ~ 80991714 (-) |
| nphp1 | LOC106577164 | coding | downstream | 62031 | 80940215 ~ 80966643 (-) |
| LOC118965579 | LOC106577163 | coding | downstream | 106317 | 80919948 ~ 80922357 (-) |
| LOC110530369 | LOC106577163 | coding | downstream | 122895 | 80903337 ~ 80905779 (-) |
| slc8a1b | LOC106577160 | coding | downstream | 381534 | 80409477 ~ 80647140 (-) |
| ppifa | LOC106577170 | coding | upstream | 139783 | 81168802 ~ 81174063 (-) |
| LOC110532756 | LOC106577174 | coding | upstream | 146826 | 81175845 ~ 81449471 (-) |
| LOC118965609 | NA | coding | upstream | 436531 | 81465550 ~ 81532357 (-) |
| rps24 | LOC106577218 | coding | upstream | 509332 | 81538351 ~ 81542584 (-) |
| qrfpra | LOC106577227 | coding | upstream | 516206 | 81545225 ~ 81557378 (-) |
| G91939 | NA | non-coding | downstream | 5146 | 81023251 ~ 81023528 (-) |
| G91932 | NA | non-coding | downstream | 9306 | 81018820 ~ 81019368 (-) |
| G91930 | NA | non-coding | downstream | 12318 | 81016136 ~ 81016356 (-) |
| G91928 | NA | non-coding | downstream | 13519 | 81014533 ~ 81015155 (-) |
| G91198 | NA | non-coding | downstream | 166652 | 80861804 ~ 80862022 (-) |
| G91946 | NA | non-coding | upstream | 5423 | 81034442 ~ 81034660 (-) |
| G91950 | NA | non-coding | upstream | 9772 | 81038791 ~ 81040113 (-) |
| G91949 | NA | non-coding | upstream | 12314 | 81041333 ~ 81044209 (-) |
| G91938 | LOC106577167 | non-coding | upstream | 15797 | 81044816 ~ 81045797 (-) |
| G91935 | NA | non-coding | upstream | 20887 | 81049906 ~ 81055756 (-) |
| G91941 | NA | other | downstream | 62 | 81027908 ~ 81028612 (-) |
| G90382 | NA | other | downstream | 886517 | 80141559 ~ 80142157 (-) |
| LOC110530200 | NA | other | downstream | 1130834 | 79862081 ~ 79917875 (-) |
| G90190 | NA | other | downstream | 1140494 | 79886675 ~ 79888180 (-) |
| G91943 | LOC106577167 | other | upstream | 1813 | 81030832 ~ 81031358 (-) |
| G91947 | NA | other | upstream | 6556 | 81035575 ~ 81036138 (-) |
| LOC110530475 | eif4ebp2 | other | upstream | 578459 | 81607478 ~ 81629726 (-) |
| G92566 | NA | other | upstream | 1131388 | 82160407 ~ 82161743 (-) |
