G91950


Basic Information

Item Value
gene id G91950
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81038791 ~ 81040113 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU101262
TCTACTGCCTATCAATCTACTGCCTATCAATCTATTGCCTATACTGATCCATGACAGTAATCAtgtctctctgttcatctcaacATCCTGGCACATTGACTGTGATAAAGCAGCATCTCCAATGACCATTCAACATTTTGCTATGCTTTATttgaaataacaaaaacaaacagATTTTGGCTTTAAACTAGATCAAACAGGAACAACATGTGAATGAAGATGgcaatagtggtggtggtgatgatgatctaCACACACGCATGCCTGCACAAGTCCTAAAGCACTTCTAAGCATGTGCAGATGAATGCCCGGGCAGAGCAGAAATGACACAAAGCCCAGACTCTTTGCCTAAAAGTCTACCTCTCAGAAAGATACAGTACTCAGTGCTTGAATAAAAACAGCATCTTTCAAAAAACGAGTGTCAGTGTACAATAAAGTGGTGTGTACAGTGTCTGGACCATgtggttctctctccccctcctggttctccttctctgtctctccacggAGCTGTATGCCTCGTGGGGTGGCCTGGTTCGGCTCGGATATCCAGGGACCTTGCCTGCACTTCCTCAAGAAGGACAAAATGCAATCCTACTATTCCTGGCCCACGGTCCCACAAACCCACAGGCACACGTGGAGCACAGGGTACAGGCTGGGCCGGGGGGCCTCAGTTTACtgcacaataaaaaaaacattttgtaatattcccTTTTTTAAAACCTTCTAACCCCCCTAGATGTAGCCAGGGCGGTGTTGTTttctgtgaggaggaggagggatattgTTGTTGTGGTTCGTGAAAAGGCTCTGCATGTGATTACACAGGATGTCAGATACAACCCCTACTGGGCTTATTTATTCGATCACGTCTTGTTCATTAGTTTAGCCAGCATCTGTTGTATCTGGAGTCGGGACAGGTTGAGGACGGAGTGTCGTGGTCGCGACCCCCCGGGGCTGCCGGGTACCAGGGGCATGTGGCGCCGCGAGGGGAGACGGGCGGGGCTGCTCTCGGCAGAGCGGCTTCTCTGGATCAACGCCCCAGCTTCCAAGTTACCATGGGGATACTGCTCCGTCTCCAGGGTAGAGGACGAGAACACGTACGACGCCAATCTTCTCAATTGGTTGGGCCTCGGGAAAGAGTGGTgcgggtggtgggggtggggccTATCCTCCTCCAACTGAAAAAGACCAATAAGAGTGGAGGAGAAAGGCATCAGGTGGGGGTGTGGCCAAGAAGACTCCgtctcttctctatctctgctGTCATGggaatgtctgtgtgtctgtctgggtctctacGTGTCTGGGTCTCTGGGTCAC
>TU101261
TCTACTGCCTATCAATCTACTGCCTATCAATCTATTGCCTATACTGATCCATGACAGTAATCAtgtctctctgttcatctcaacATCCTGGCACATTGACTGTGATAAAGCAGCATCTCCAATGACCATTCAACATTTTGCTATGCTTTATttgaaataacaaaaacaaacagATTTTGGCTTTAAACTAGATCAAACAGGAACAACATGTGAATGAAGATGgcaatagtggtggtggtgatgatgatctaCACACACGCATGCCTGCACAAGTCCTAAAGCACTTCTAAGCATGTGCAGATGAATGCCCGGGCAGAGCAGAAATGACACAAAGCCCAGACTCTTTGCCTAAAAGTCTACCTCTCAGAAAGATACAGTACTCAGTGCTTGAATAAAAACAGCATCTTTCAAAAAACGAGTGTCAGTGTACAATAAAGTGGTGTGTACAGTGTCTGGACCATgtggttctctctccccctcctggttctccttctctgtctctccacggAGCTGTATGCCTCGTGGGGTGGCCTGGTTCGGCTCGGATATCCAGGGACCTTGCCTGCACTTCCTCAAGAAGGACAAAATGCAATCCTACTATTCCTGGCCCACGGTCCCACAAACCCACAGGCACACGTGGAGCACAGGGTACAGGCTGGGCCGGGGGGCCTCAGTTTACtgcacaataaaaaaaacattttgtaatattcccTTTTTTAAAACCTTCTAACCCCCCTAGATGTAGCCAGGGCGGTGTTGTTttctgtgaggaggaggagggatattgTTGTTGTGGTTCGTGAAAAGGCTCTGCATGTGATTACACAGGATGTCAGATACAACCCCTACTGGGCTTATTTATTCGATCACGTCTTGTTCATTAGTTTAGCCAGCATCTGTTGTATCTGGAGTCGGGACAGGTTGAGGACGGAGTGTCGTGGTCGCGACCCCCCGGGGCTGCCGGGTACCAGGGGCATGTGGCGCCGCGAGGGGAGACGGGCGGGGCTGCTCTCGGCAGAGCGGCTTCTCTGGATCAACGCCCCAGCTTCCAAGTTACCATGGGGATACTGCTCCGTCTCCAGGGTAGAGGACGAGAACACGTACGACGCCAATCTTCTCAATTGGTTGGGCCTCGGGAAAGAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101262 False 1323 lncRNA 0.28 1 81038791 81040113
TU101261 True 1144 lncRNA 0.49 1 81038970 81040113

Neighbor

gene id symbol gene type direction distance location
LOC110530390 LOC106577181 coding downstream 47077 80975992 ~ 80991714 (-)
nphp1 LOC106577164 coding downstream 72148 80940215 ~ 80966643 (-)
LOC118965579 LOC106577163 coding downstream 116434 80919948 ~ 80922357 (-)
LOC110530369 LOC106577163 coding downstream 133012 80903337 ~ 80905779 (-)
slc8a1b LOC106577160 coding downstream 391651 80409477 ~ 80647140 (-)
ppifa LOC106577170 coding upstream 128689 81168802 ~ 81174063 (-)
LOC110532756 LOC106577174 coding upstream 135732 81175845 ~ 81449471 (-)
LOC118965609 NA coding upstream 425437 81465550 ~ 81532357 (-)
rps24 LOC106577218 coding upstream 498238 81538351 ~ 81542584 (-)
qrfpra LOC106577227 coding upstream 505112 81545225 ~ 81557378 (-)
G91946 NA non-coding downstream 4131 81034442 ~ 81034660 (-)
G91942 NA non-coding downstream 9772 81028674 ~ 81029019 (-)
G91939 NA non-coding downstream 15263 81023251 ~ 81023528 (-)
G91932 NA non-coding downstream 19423 81018820 ~ 81019368 (-)
G91930 NA non-coding downstream 22435 81016136 ~ 81016356 (-)
G91949 NA non-coding upstream 1220 81041333 ~ 81044209 (-)
G91938 LOC106577167 non-coding upstream 4703 81044816 ~ 81045797 (-)
G91935 NA non-coding upstream 9793 81049906 ~ 81055756 (-)
G91951 NA non-coding upstream 15992 81056105 ~ 81056419 (-)
G91952 NA non-coding upstream 16752 81056865 ~ 81057248 (-)
G91947 NA other downstream 2653 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 7433 81030832 ~ 81031358 (-)
G91941 NA other downstream 10179 81027908 ~ 81028612 (-)
G90382 NA other downstream 896634 80141559 ~ 80142157 (-)
LOC110530475 eif4ebp2 other upstream 567365 81607478 ~ 81629726 (-)
G92566 NA other upstream 1120294 82160407 ~ 82161743 (-)
LOC110532782 LOC106577197 other upstream 1253700 82291777 ~ 82301867 (-)
LOC100301648 LOC106577193 other upstream 1909501 82949609 ~ 83267163 (-)

Expression


Co-expression Network