G91949


Basic Information

Item Value
gene id G91949
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81041333 ~ 81044209 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU101258
CTTTAATCATATTTTGGTTGTATACAAGCGTCTGAGAAATGTCTAGTATAGTTGACATACATGGATAAAAAAAGGCACAGAAAGTCAATAGCACAGCATGATacatataatactgtatatatgtacatgttATGTTCTCTGTTTTCTTTTAAATTGCTCAACCCAGGTGTGATTTCATGTGTAGCCATGGTTACAAACAGTGCATTGGCAAATATATGTACAGCTGTGAAGCAAATATACAAGATCACACGACGAGATGACATCAAAGTGATGAAGCGTTGTCGATCAATGTACTAATATCCATTTTTTGTGTGTTTCTTTAAAAAATGGCTCGATATACATGCTTTTAAATACATCATGTTATACATAACTCTACAGGGTTATTGTGATACAAAAACAAATGCTTCTAATATATTCACAAAAAGAGAATAGtgactgtactgtcctctaccgaGAGACACTCACGGATCACGATGTTGTTCAAATAATGGTTGACATCTTTTACATTCGCTCCAAAGTGTTAAAAAACTATGATTGCCACTGTATTATCTTACATATTCGCATTCCAACCCACCTCCCACATACATTATTTGCAATGAACAGGAGAATAGTTCCGTTTTTCCAGTACTGCGAGTCATTAGACAGCCTTTGAAGAATTTGAGTCGAGAAGGACTTTTATACAAGagtctcttctttcactgaacagatgtaggatcttcatttgagcacTCTTTTGATGCGGAGAATTTTCCAGCACGGcgggaaatgcaaacttgtagtgcatTTGAGTTGTGTTTGTcgattccactttgaaatttcagacttgatttgtatGGTATGAACCATACAAAAATGTCAAATCATTATAATCcagataataattcacatttcctggtgctgaaggattattttccttctgtagcaaactggatcaaattaagatcctacatctgtatcacTCACAGacacatttgtatttgttttatttctcctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacaagttctcatttgcaactgcgacctggccaagattggGACACTGGGCAATAAATAAGTGACTCAGAAACCAGACAATGTTTTTCCTCTTGCCGTCTGTCTTTCCACAAGCACAAATAAGTCACCAAGATCTACATGCAATCAGGACAGTACACACAGGACTGGAGCAACATTACACAGGCTACTAAGCAGCATCATTACAGTATATGATTGCATGCCATTTTACATGAGAATGCTTCTGTAGGAAAACTCCCAAAACCCACTTCAACATTACCAGACAAACTAAATGTTtttaacaaatgttttaaacagatGCCTACCAACCCTACTTAGGTATTCACTGATCCGTGGGTGTACTTTTCTGGTTAGGAAATCAACCAAAGTGCAGCAGATAAACTGTAGACCAGTGTAAACAAGGACCTATCACATCAGACTTTACTAGTTCAAGCGAAGTGGCGTCCAATATTATTTATTGTACGAACTGAACTGAtagggcccatattcacaaagcatctcaagAGAAGGAGTGCTAATCTAGCATACATCTTTCCTTTTAGATCATAGGGaattagattacatggacaggggatacctgatcttagatcagcactcctaccctaAGATGCTCGACATAGAGCCTCAGAACTAAGCTTCATCAGAGGGTGATGAATACATTCAGTGAATGTCATTATTGGATCACTGAAAACAGTGAAATGGATGGAAGACCAACTGGGCAACTgtattataccccccccccccccccccattatacAATCTAGACATGGCCTCAATTCAATTAAACCTGCATTGTGGTGTTAAAGCAGTATAGCTCTTCTTTTCCCATGGTCAAATTAAATGAATTGATAGAGAGGTGGTGGGTCAAATCCATAGAATTAGGAATCAGAATGGATCATAACAGGAGTGGTGTGATGGAAAACATCCAATCATGTTGATTTGATCAACATTGGTGTCATATTGGCTTAGATGTGATGGTAGGAAGATTTGAATTTCACATTGACATAAATCAATGCCTACTAATAATTAAATAGTGTCTCTATGGTTAAATCCTGGATTTAACCATAGAGACATAAATCCTACTACTACTGGCCCAAAGCGAGCAGCTCCGGCACCCCCTTGCGGCAGGGATCCCGGTTCAAACCCCACATGAGCCCTGCTGCTCCTATCCTGTCATTAAATAATTATTATGGAAAGTAGTTTGGAAATTCtcctttgtaaaaaaataaaaagcactAGTACTAGGTAGAGAGGTAAGTTTGTAAACAAAGGCACTGCGTAAACATTACTAGGCCAGGTTCAATTGAATTTCAGCCTAAGTCCCCTccttttaaaacaattacagtagTTAGAAAGACATCTTGACAATATGGATATTTCACAAATCTATAGTTAAGACTGGTGCATCAAAATGAAGGTGTGTTCTTAACAAGAGCCGTGTCCTCTGTCCAGAACGAAAGGCAAGATAAATAACAGTAAACTAGATCAATTATGGAAAATAAATCATTATTGCTGGTAACACTGGTAATACTGTCACAACTGAAACTGAATACAATATGATAGACATGTTATAAACGTGTTATATACATCTTATAAACATTTATATGCAGTAAGAAAGCAGCATTCCACTGCAATGAGGGAAACTATTGCCTATCAATCTACTGCTTATCAATCTACTGCTTATTAATCTATTGCATATCAATCTATTGCCTGTCAATCTATTGCTTATTAATCTATTGCCTA
>TU101259
CTTTAATCATATTTTGGTTGTATACAAGCGTCTGAGAAATGTCTAGTATAGTTGACATACATGGATAAAAAAAGGCACAGAAAGTCAATAGCACAGCATGATacatataatactgtatatatgtacatgttATGTTCTCTGTTTTCTTTTAAATTGCTCAACCCAGGTGTGATTTCATGTGTAGCCATGGTTACAAACAGTGCATTGGCAAATATATGTACAGCTGTGAAGCAAATATACAAGATCACACGACGAGATGACATCAAAGTGATGAAGCGTTGTCGATCAATGTACTAATATCCATTTTTTGTGTGTTTCTTTAAAAAATGGCTCGATATACATGCTTTTAAATACATCATGTTATACATAACTCTACAGGGTTATTGTGATACAAAAACAAATGCTTCTAATATATTCACAAAAAGAGAATAGtgactgtactgtcctctaccgaGAGACACTCACGGATCACGATGTTGTTCAAATAATGGTTGACATCTTTTACATTCGCTCCAAAGTGTTAAAAAACTATGATTGCCACTGTATTATCTTACATATTCGCATTCCAACCCACCTCCCACATACATTATTTGCAATGAACAGGAGAATAGTTCCGTTTTTCCAGTACTGCGAGTCATTAGACAGCCTTTGAAGAATTTGAGTCGAGAAGGACTTTTATACAAGagtctcttctttcactgaacagatgtaggatcttcatttgagcacTCTTTTGATGCGGAGAATTTTCCAGCACGGcgggaaatgcaaacttgtagtgcatTTGAGTTGTGTTTGTcgattccactttgaaatttcagacttgatttgtatGGTATGAACCATACAAAAATGTCAAATCATTATAATCcagataataattcacatttcctggtgctgaaggattattttccttctgtagcaaactggatcaaattaagatcctacatctgtatcacTCACAGacacatttgtatttgttttatttctcctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacaagttctcatttgcaactgcgacctggccaagattggGACACTGGGCAATAAATAAGTGACTCAGAAACCAGACAATGTTTTTCCTCTTGCCGTCTGTCTTTCCACAAGCACAAATAAGTCACCAAGATCTACATGCAATCAGGACAGTACACACAGGACTGGAGCAACATTACACAGGCTACTAAGCAGCATCATTACAGTATATGATTGCATGCCATTTTACATGAGAATGCTTCTGTAGGAAAACTCCCAAAACCCACTTCAACATTACCAGACAAACTAAATGTTtttaacaaatgttttaaacagatGCCTACCAACCCTACTTAGGTATTCACTGATCCGTGGGTGTACTTTTCTGGTTAGGAAATCAACCAAAGTGCAGCAGATAAACTGTAGACCAGTGTAAACAAGGACCTATCACATCAGACTTTACTAGTTCAAGCGAAGTGGCGTCCAATATTATTTATTGTACGAACTGAACTGAtagggcccatattcacaaagcatctcaagAGAAGGAGTGCTAATCTAGCATACATCTTTCCTTTTAGATCATAGGGaattagattacatggacaggggatacctgatcttagatcagcactcctaccctaAGATGCTCGACATAGAGCCTCAGAACTAAGCTTCATCAGAGGGTGATGAATACATTCAGTGAATGTCATTATTGGATCACTGAAAACAGTGAAATGGATGGAAGACCAACTGGGCAACTgtattataccccccccccccccccccattatacAATCTAGACATGGCCTCAATTCAATTAAACCTGCATTGTGGTGTTAAAGCAGTATAGCTCTTCTTTTCCCATGGTCAAATTAAATGAATTGATAGAGAGGTGGTGGGTCAAATCCATAGAATTAGGAATCAGAATGGATCATAACAGGAGTGGTGTGATGGAAAACATCCAATCATGTTGATTTGATCAACATTGGTGTCATATTGGCTTAGATGTGATGGTAGGAAGATTTGAATTTCACATTGACATAAATCAATGCCTACTAATAATTAAATAGTGTCTCTATGGTTAAATCCTGGATTTAACCATAGAGACATAAATCCTACTACTACTGGCCCAAAGCGAGCAGCTCCGGCACCCCCTTGCGGCAGGGATCCCGGTTCAAACCCCACATGAGCCCTGCTGCTCCTATCCTGTCATTAAATAATTATTATGGAAAGTAGTTTGGAAATTCtcctttgtaaaaaaataaaaagcactAGTACTAGGTAGAGAGGTAAGTTTGTAAACAAAGGCACTGCGTAAACATTACTAGGCCAGGTTCAATTGAATTTCAGCCTAAGTCCCCTccttttaaaacaattacagtagTTAGAAAGACATCTTGACAATATGGATATTTCACAAATCTATAGTTAAGACTGGTGCATCAAAATGAAGGTGTGTTCTTAACAAGAGCCGTGTCCTCTGTCCAGAACGAAAGGCAAGATAAATAACAGTAAACTAGATCAATTATGGAAAATAAATCATTATTGCTGGTAACACTGGTAATACTGTCACAACTGAAACTGAATACAATATGATAGACATGTTATAAACGTGTTATATACATCTTATAAACATTTATATGCAGTAAGAAAGCAGCATTCCACTGCAATGAGGGAAACTATTGCCTATCAATCTACTGCTTATCAATCTACTGCTTATTAATCTATTGCATATCAATCTATTGCCTGTCAATCTATTGCTTATTAATCTATTGCCTA
>TU101260
CTTTAATCATATTTTGGTTGTATACAAGCGTCTGAGAAATGTCTAGTATAGTTGACATACATGGATAAAAAAAGGCACAGAAAGTCAATAGCACAGCATGATacatataatactgtatatatgtacatgttATGTTCTCTGTTTTCTTTTAAATTGCTCAACCCAGGTGTGATTTCATGTGTAGCCATGGTTACAAACAGTGCATTGGCAAATATATGTACAGCTGTGAAGCAAATATACAAGATCACACGACGAGATGACATCAAAGTGATGAAGCGTTGTCGATCAATGTACTAATATCCATTTTTTGTGTGTTTCTTTAAAAAATGGCTCGATATACATGCTTTTAAATACATCATGTTATACATAACTCTACAGGGTTATTGTGATACAAAAACAAATGCTTCTAATATATTCACAAAAAGAGAATAGtgactgtactgtcctctaccgaGAGACACTCACGGATCACGATGTTGTTCAAATAATGGTTGACATCTTTTACATTCGCTCCAAAGTGTTAAAAAACTATGATTGCCACTGTATTATCTTACATATTCGCATTCCAACCCACCTCCCACATACATTATTTGCAATGAACAGGAGAATAGTTCCGTTTTTCCAGTACTGCGAGTCATTAGACAGCCTTTGAAGAATTTGAGTCGAGAAGGACTTTTATACAAGagtctcttctttcactgaacagatgtaggatcttcatttgagcacTCTTTTGATGCGGAGAATTTTCCAGCACGGcgggaaatgcaaacttgtagtgcatTTGAGTTGTGTTTGTcgattccactttgaaatttcagacttgatttgtatGGTATGAACCATACAAAAATGTCAAATCATTATAATCcagataataattcacatttcctggtgctgaaggattattttccttctgtagcaaactggatcaaattaagatcctacatctgtatcacTCACAGacacatttgtatttgttttatttctcctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacacctttatttaaccaggtaggccagttgagaacaagttctcatttgcaactgcgacctggccaagattggGACACTGGGCAATAAATAAGTGACTCAGAAACCAGACAATGTTTTTCCTCTTGCCGTCTGTCTTTCCACAAGCACAAATAAGTCACCAAGATCTACATGCAATCAGGACAGTACACACAGGACTGGAGCAACATTACACAGGCTACTAAGCAGCATCATTACAGTATATGATTGCATGCCATTTTACATGAGAATGCTTCTGTAGGAAAACTCCCAAAACCCACTTCAACATTACCAGACAAACTAAATGTTtttaacaaatgttttaaacagatGCCTACCAACCCTACTTAGGTATTCACTGATCCGTGGGTGTACTTTTCTGGTTAGGAAATCAACCAAAGTGCAGCAGATAAACTGTAGACCAGTGTAAACAAGGACCTATCACATCAGACTTTACTAGTTCAAGCGAAGTGGCGTCCAATATTATTTATTGTACGAACTGAACTGAtagggcccatattcacaaagcatctcaagAGAAGGAGTGCTAATCTAGCATACATCTTTCCTTTTAGATCATAGGGaattagattacatggacaggggatacctgatcttagatcagcactcctaccctaAGATGCTCGACATAGAGCCTCAGAACTAAGCTTCATCAGAGGGTGATGAATACATTCAGTGAATGTCATTATTGGATCACTGAAAACAGTGAAATGGATGGAAGACCAACTGGGCAACTgtattataccccccccccccccccccattatacAATCTAGACATGGCCTCAATTCAATTAAACCTGCATTGTGGTGTTAAAGCAGTATAGCTCTTCTTTTCCCATGGTCAAATTAAATGAATTGATAGAGAGGTGGTGGGTCAAATCCATAGAATTAGGAATCAGAATGGATCATAACAGGAGTGGTGTGATGGAAAACATCCAATCATGTTGATTTGATCAACATTGGTGTCATATTGGCTTAGATGTGATGGTAGGAAGATTTGAATTTCACATTGACATAAATCAATGCCTACTAATAATTAAATAGTGTCTCTATGGTTAAATCCTGGATTTAACCATAGAGACATAAATCCTACTACTACTGGCCCAAAGCGAGCAGCTCCGGCACCCCCTTGCGGCAGGGATCCCGGTTCAAACCCCACATGAGCCCTGCTGCTCCTATCCTGTCATTAAATAATTATTATGGAAAGTAGTTTGGAAATTCtcctttgtaaaaaaataaaaagcactAGTACTAGGTAGAGAGGTAAGTTTGTAAACAAAGGCACTGCGTAAACATTACTAGGCCAGGTTCAATTGAATTTCAGCCTAAGTCCCCTccttttaaaacaattacagtagTTAGAAAGACATCTTGACAATATGGATATTTCACAAATCTATAGTTAAGACTGGTGCATCAAAATGAAGGTGTGTTCTTAACAAGAGCCGTGTCCTCTGTCCAGAACGAAAGGCAAGATAAATAACAGTAAACTAGATCAATTATGGAAAATAAATCATTATTGCTGGTAACACTGGTAATACTGTCACAACTGAAACTGAATACAATATGATAGACATGTTATAAACGTGTTATATACATCTTATAAACATTTATATGCAGTAAGAAAGCAGCATTCCACTGCAATGAGGGAAACTATTGCCTATCAATCTACTGCTTATCAATCTACTGCTTATTAATCTATTGCATATCAATCTATTGCCTGTCAATCTATTGCTTATTAATCTATTGCCTA

Function

NR:

description
nucleotide-binding oligomerization domain-containing protein 2 isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101258 False 2844 lncRNA 0.53 2 81041333 81044209
TU101259 False 2844 lncRNA 0.37 2 81041333 81044209
TU101260 True 2844 lncRNA 0.37 2 81041333 81044209

Neighbor

gene id symbol gene type direction distance location
LOC110530390 LOC106577181 coding downstream 49619 80975992 ~ 80991714 (-)
nphp1 LOC106577164 coding downstream 74690 80940215 ~ 80966643 (-)
LOC118965579 LOC106577163 coding downstream 118976 80919948 ~ 80922357 (-)
LOC110530369 LOC106577163 coding downstream 135554 80903337 ~ 80905779 (-)
slc8a1b LOC106577160 coding downstream 394193 80409477 ~ 80647140 (-)
ppifa LOC106577170 coding upstream 124593 81168802 ~ 81174063 (-)
LOC110532756 LOC106577174 coding upstream 131636 81175845 ~ 81449471 (-)
LOC118965609 NA coding upstream 421341 81465550 ~ 81532357 (-)
rps24 LOC106577218 coding upstream 494142 81538351 ~ 81542584 (-)
qrfpra LOC106577227 coding upstream 501016 81545225 ~ 81557378 (-)
G91950 NA non-coding downstream 1220 81038791 ~ 81040113 (-)
G91946 NA non-coding downstream 6673 81034442 ~ 81034660 (-)
G91942 NA non-coding downstream 12314 81028674 ~ 81029019 (-)
G91939 NA non-coding downstream 17805 81023251 ~ 81023528 (-)
G91932 NA non-coding downstream 21965 81018820 ~ 81019368 (-)
G91938 LOC106577167 non-coding upstream 607 81044816 ~ 81045797 (-)
G91935 NA non-coding upstream 5697 81049906 ~ 81055756 (-)
G91951 NA non-coding upstream 11896 81056105 ~ 81056419 (-)
G91952 NA non-coding upstream 12656 81056865 ~ 81057248 (-)
G91953 LOC106577168 non-coding upstream 27568 81071777 ~ 81078952 (-)
G91947 NA other downstream 5195 81035575 ~ 81036138 (-)
G91943 LOC106577167 other downstream 9975 81030832 ~ 81031358 (-)
G91941 NA other downstream 12721 81027908 ~ 81028612 (-)
G90382 NA other downstream 899176 80141559 ~ 80142157 (-)
LOC110530475 eif4ebp2 other upstream 563269 81607478 ~ 81629726 (-)
G92566 NA other upstream 1116198 82160407 ~ 82161743 (-)
LOC110532782 LOC106577197 other upstream 1249604 82291777 ~ 82301867 (-)
LOC100301648 LOC106577193 other upstream 1905405 82949609 ~ 83267163 (-)

Expression


Co-expression Network