G91316


Basic Information

Item Value
gene id G91316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81076625 ~ 81078247 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU100569
gtcctagggatcaggtcctctgagagagagaaagaaagagagaaagagagaattagagagagcatacttaaattcacacaggacaccggataggacaggaaaaGTACTCCAAATATAACAAATTGACCCTAGATAATCaaattgccaagataatccatccacctgacaggtgtggcatatcaacaagctgattaaacagcacgatcattacacaggtgcaccttgtgctggggacaataaaaggccactctaaaatgtgcagttttgtcacacacataccacagatgtctcaagttttgagggagcgtgcaatttacatgctgactgcaggaatgtccaccagagctgatgACAGAGAATTGAATATTCATTTGTCtttggcaatacgtccaaccagcctcacaactgcagaacacgtataaccacgccagcccaggaccggTGGGTCCTGTTTTCTTCACCTGCtgtatcgtctgagaccagccactcggacagctgatgaaactgaggtgtATTTCGgtatgtaataaagCagagcccaggtgtgtcccatttcgctgATGACCacaggtggtatacagaagatagccctatttggtaaaagaccaagtccatattatgacaagaacagctcaaataagcaaagagaaacgacaatccatcaatactttaagacatgaaggtcagtcaatacgtaaaatttcaacaactttgaaagattcttcaagtgcagtcgcaaaaaccatcaagcgctatgatgaagctGTCTcttgaggacctccacaggaaaggaagacccagagttacctctaaggcagaggataagttcattagagttaccagactcagaaatgTCAGCCCAAATAAAGgcttcacagagctcaagtaacagacacatctcaacatcaactgttcagaggagactgtgtgaatcaggccttcatggtcgaattgctgcaaagaaaccactactaaaggacaccaataagatgaaACACTAACAATggtcattagactggtggaagtctgtcctttcgtctgatgagtccaaattttctttgtgagacgcagagtaggtgaacggatgatgtccgcatgtgtggttcccaccatgaagcatggacgagaaggtgtgatggtgtgggggtgcttcgctggtgacaccgcctgtgatttatttagaattcaaggcacacaatcagcatggctaccacagtattctgtaGCGATccaccattccatctggtttgctcttagtgggactataatttgtttttcaataggacaatgacctaacacacctctaggctgtgtaagtgttatttgaccaagaaggagagtgatggagtgctgcattagattacctggcctccacaatcacctgacctcaacccaattgagatggtttgagatgagttggacaaCAGATTGagggaaaaacagccaacaagtgctcagcatatgtgggaactccttcaaaactggttggaaaagcattccaggtgaagctggttga

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU100569 True 1516 lncRNA 0.49 2 81076625 81078247

Neighbor

gene id symbol gene type direction distance location
LOC110532748 LOC106577167 coding upstream 20020 81014705 ~ 81056605 (+)
LOC110530352 LOC106577159 coding upstream 690212 80383566 ~ 80386413 (+)
LOC110530346 LOC106577158 coding upstream 712599 80359816 ~ 80364026 (+)
arhgef33 LOC106577154 coding upstream 812891 80248099 ~ 80267460 (+)
slc29a1a LOC106577101 coding upstream 1042848 79956334 ~ 80033777 (+)
zcchc24 LOC106577169 coding downstream 5787 81084034 ~ 81175099 (+)
LOC118966718 NA coding downstream 253299 81331546 ~ 81332112 (+)
ipyr ipyr coding downstream 541973 81620220 ~ 81635022 (+)
LOC110530473 LOC106577216 coding downstream 557147 81635394 ~ 81641798 (+)
tysnd1 tysnd1 coding downstream 563726 81641973 ~ 81645418 (+)
G91317 NA non-coding upstream 7153 81068763 ~ 81069472 (+)
G91313 NA non-coding upstream 40430 81035694 ~ 81036195 (+)
G91311 NA non-coding upstream 43802 81032549 ~ 81032823 (+)
G91310 NA non-coding upstream 44884 81031511 ~ 81031741 (+)
G91352 NA non-coding downstream 29053 81107300 ~ 81107772 (+)
G91327 NA non-coding downstream 81764 81160011 ~ 81164594 (+)
G91429 NA non-coding downstream 206322 81284569 ~ 81285562 (+)
G91432 NA non-coding downstream 209026 81287273 ~ 81287590 (+)
G91435 NA non-coding downstream 212438 81290685 ~ 81290919 (+)
G91064 NA other upstream 310470 80765114 ~ 80766155 (+)
acoxl acoxl other upstream 1311266 79720751 ~ 79765359 (+)
G89667 NA other upstream 1526974 79549017 ~ 79549651 (+)
G87159 NA other upstream 3506155 77570015 ~ 77570470 (+)
G86614 NA other upstream 3952198 77123935 ~ 77124427 (+)
G91541 LOC106591086 other downstream 460084 81538331 ~ 81541400 (+)
G91779 NA other downstream 799292 81877539 ~ 81879178 (+)
LOC110530526 LOC106577204 other downstream 827885 81906132 ~ 81907399 (+)
LOC110530572 LOC106577202 other downstream 1050397 82128619 ~ 82163498 (+)
G92511 NA other downstream 1063877 82142124 ~ 82142587 (+)

Expression


Co-expression Network