XLOC_020348 (cilp2)


Basic Information

Item Value
gene id XLOC_020348
gene name cilp2
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 18469004 ~ 18485470 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040395
ATGTGGGACTTCACGGTGGTGACGTTGGTGCTGTCTACTGTCTTTGTTGTGTCTCTGGCACAAGGACCCATCTGGGACAGCTCACGTCTTCGGAGGTTAAACCAAACAGACAGAAACAGAAAGCTGGCTTACAACACCCTCGTGGAACCACAGACCACAGGCGTGACAGAGTGGACATCCTGGTTCAATATTGATCATCCAGGAGGAAACGGTGACTATGAGAGGTTAGAAGCCATTCGCTTTTACTATCGAGAAAGAGTCTGCTCACGACCTGTAGCGATGGAGGCCCGTACCAcagactgggttgcagctgcagaTACAGGGGAGGTGGTCCATTCCAGTCTGGAGAAGGGCTTCTGGTGCATCAATAAGGAGCAGCCGTTTGGCCGCAGCTGCTCCAACTACCATGTGCGATTCCAGTGTCCACCAGtgcactcATACTGGACTGACTGGAGTGAATGGACGCCTTGCAGTGCCACTGCCTGTAATGATGTTGGCATCCAAGTCCGTCAGAGGAAATGCATGAGCACGCAACCTCTTCCATTGCTGCTTTCGCCCGTCTGTGTGGGACCTCACATTGAAAGGAGAGAGTGTTCAACACCACCATGTCAAGCCATGTGGAGCCAGTGGGGTTCATGGGGAGCTTGCTCAGTAACCTGTGGAAAGGGACGGAGGACAAGACGTAGGACATGCCACAGATCTTCTACTAAGATTCAGTGTACAGGACGACCCATAGAGGTGCAAAAGTGTGGAAATCCATGCCCAGtgaaATGCAAACGTGTCTGTCCTGGGGGACGTCCCGATAAGAGCTGCAGCTACTGTATCTGCGATGGACAGGCACTACATGGGGAAGTCTTCAGCATTACAGGGGTCCCAGTGATGAATGCCACGGTGGCTTTGGCCAGCCAAGCCAAGATTATCCGTGCCCACACTGATGCCAAGGGTCAGTTCAAGATGGATGGGCTGTGCATCAGTCCTCAGACCCAAATTGTCATTAGAAAGGATAAATTTGCACCTGCCACTCTCCCAGTGTCCAACAACAGTACTGATGAACTTTGGGTACGGGCTATCTTGCAATCATCAGAAAAGCCATATATTGAGAAGCATCCTGAAGACAAAGTACGTTACGAGGGACAACGTGCAACTCTTTGCTGTAGAGCAACAGGATCACCAAAACCTGACAAATATTACTGGTACCACAATGGAACCTTACTGAATCGTACAATTTTCAAATATGACGAAGATTTGATATTGCGAGACCTCAAACCAGAGCAGTCTGGGCAATATCACTGCAAAGCAACTAGTCTGACAGGCAGCATCAAGTCTACTTCAGCGGTCCTCACTGTTTTCACTAAAGGGACCCCAGCATGCAAGTCAACACCTGAAACCCACCTGATCAAACTACCATTAGACTGCAAACAGCCTGGAACAGACTCCAAATTTTACAATGCAGGTCGCTGTCCACACAACAAATGTCCTGGGGCACTGGACTTTGACATGCGATGCAGGGATGGAACAGGTTTCTGCTGTGGGGTCAAAGAAATGGACGCAAAAGAAATCAACTGTGGCCGCTACACCCTCCCTATCAAGGTTGTGAGTGAATGTGGCTGCCAAACTTGTGTAGAGCCTAAAGTTCTTGTACGGGGCAGGGTGGTGGCAACAGACAATGATGAACCTCTGCGCTTTGGACACATTTACATTGGGAAGGAACGAATAGGTACTACAGGATATCAGGGTGGCTTCACAATCCAGGTGTCTCCAGAAACACAGCGTTTAGTGGTAAACTTTGTGGACCCTTCTCAGAAGTTCATTGACACAATCAAGGTTTTTATCTTTGACAAGAGAGGAGGTGCAGTCTACCATGACGTCAAAGTGATGAGGAAGCAGGAACCTATTGATATCAATGCTGCAGAAAGCAACACCATTTACCTAGGTGAAATGAAGGATGAGGATCCCATCGGTCAACTGGTCATACCTCCAAACTCTTTCCATAAAAACACAGGGGAAGTGTATGAAGGGACTGTTAAGGCCAGTGTGACATTCCTTGATCCACGCAATATTACAATGGCTGCTGCCGCCCCTGGTGATCTTAACTTTGTCGATGATGAAGGAGACATGCTCCCTCTCAGGACATATGGAATGTTTTCAGTAGATTTCCGAGATGGAGAAAACCAGGAGGTTCTAGGAGCTGGTGCAGTGCAAGTTCTCCTTGATACAGAGCATGTCAAAATGCAGGAGCACATCCCTGCTATGAAACTCTGGTCCCTCAATCCTGACACAGGTATTTGGGAGGAGGAGAGTAACTTTCAGCCAACACAAAGTACCATTGCTGGCACTGGGAGAAACAAACGAGAGGAACGCACATTCTTAATAGGAAATATGGAAATCAGGGAGCGTAGGTTGTTCAATCTTGATGTACCTGAAAATCGCCGCTGCTATGTCAAGGTTAGGGCATACATGAGTGACAAGTTCTTGCCCAACGAGCAACTCGAAGGAGTTGTAATAAACTTGATTAACCTGGAACCTAAACCTGGTTACTCGTCAAATCCGCGAGCCTGGGGTCGCTTTGATAGCGTGATAACAGGACCAAACGGTGCTTGTCTTCCAGCTTTCTGTGATGCTCAGAGGGCTGATGCTTACACAGCTTATGTAACGGCTATAATGGGAGGAGAGGAACTAGAAGCAGCTCCCTCAATGCCAAAAATGAACCCAAACATTATTGGTGTGTCTCAGCCATATTTAGGGAAGTTAGATTACCAGCGTTCAGATCATGAGGACTCAGCACTCAAAAAAACAGCCTTCCGAATAAACCTGGCCAAACCAAACCCTAACAATTTTGATGAAACAAATGGACCCATCTATCCTTTCCAGAGTTTAATTGCATGTGAAAATGCACCTGTTGATGCCAACCACTTTCGTTTTTTCCGTGTTGAAAAAGATAAATATGAATACAATGTGGTACCCTTTCAGGAAAGTGACCTTACATCTTGGACTGGAGACTACCTTTCCTGGTGGCCAAATCCACAAGAGTTCAGAGCTTGCTTCATTAAAGTTAAGATTCATGGAGCTACAGAAATTATGGTAAGGTCAAGAAATCTTGGTGGGACTCATCCTCAAACAAGAGGTCAGTTGTATGGTATTAGAGACATTCGCAGTACTCGAGACTTACACCATCCCAACACCTCTGCTGCTTGTCTTGAATTTAAGTGCAGCGGGATGCTCTTTGATCAAGGTAGTGTAGACAGGTCACTCATTTCTGTGATCCCACAGGCCAACTGCCGTCGTATAGGCATTAACAGTCTCCTGCAAGAGTATCTGATAAAGCATCCCCCTGTTCTTCAGAATAATGAGTCACATGCATTCAATATGTTAGCACCCGTTGATCCCCTTGGACACAATTATGGAATATACACCGTCACGGACCAGAACCCACGCGTTGCCAAAGAGATCGCCATTGGCCGCTGCTTTGATGGAACTTCAGATGGTTTTTCCAGGGAGATGAAGTCAGATTCTGGAGTGGCACTGACGTTCAGCTGCCCTAAAAGAACTGTGAATCGCGAGAGCTTATTCCAACGCTTGCAAACAAATCCAGGCCTAACACTAACACAGATGGCACGGGAGATGAGGGAGTCCCAGGGATTACAAGTCAGAAGAGGGTCAACTCAAATGGTGGCCTACCCCTTTGGCCAACAGGGCAGGAGCCAGAACCGCAGAGCCACGAACACTAACAGAAGGAGACCTGCTTCAAGGACACAACCAAGACAGTAGATCTTTAG
>TCONS_00040396
GCGTGACAGAGTGGACATCCTGGTTCAATATTGATCATCCAGGAGGAAACGGTGACTATGAGAGGTTAGAAGCCATTCGCTTTTACTATCGAGAAAGAGTCTGCTCACGACCTGTAGCGATGGAGGCCCGTACCAcagactgggttgcagctgcagaTACAGGGGAGGTGGTCCATTCCAGTCTGGAGAAGGGCTTCTGGTGCATCAATAAGGAGCAGCCGTTTGGCCGCAGCTGCTCCAACTACCATGTGCGATTCCAGTGTCCACCAGCCATGTGGAGCCAGTGGGGTTCATGGGGAGCTTGCTCAGTAACCTGTGGAAAGGGACGGAGGACAAGACGTAGGACATGCCACAGATCTTCTACTAAGATTCAGTGTACAGGACGACCCATAGAGGTGCAAAAGTGTGGAAATCCATGCCCAGtgaaATGCAAACGTGTCTGTCCTGGGGGACGTCCCGATAAGAGCTGCAGCTACTGTATCTGCGATGGACAGGCACTACATGGGGAAGTCTTCAGCATTACAGGGGTCCCAGTGATGAATGCCACGGTGGCTTTGGCCAGCCAAGCCAAGATTATCCGTGCCCACACTGATGCCAAGGGTCAGTTCAAGATGGATGGGCTGTGCATCAGTCCTCAGACCCAAATTGTCATTAGAAAGGATAAATTTGCACCTGCCACTCTCCCAGTGTCCAACAACAGTACTGATGAACTTTGGGTACGGGCTATCTTGCAATCATCAGAAAAGCCATATATTGAGAAGCATCCTGAAGACAAAGTACGTTACGAGGGACAACGTGCAACTCTTTGCTGTAGAGCAACAGGATCACCAAAACCTGACAAATATTACTGGTACCACAATGGAACCTTACTGAATCGTACAATTTTCAAATATGACGAAGATTTGATATTGCGAGACCTCAAACCAGAGCAGTCTGGGCAATATCACTGCAAAGCAACTAGTCTGACAGGCAGCATCAAGTCTACTTCAGCGGTCCTCACTGTTTTCACTAAAGGGACCCCAGCATGCAAGTCAACACCTGAAACCCACCTGATCAAACTACCATTAGACTGCAAACAGCCTGGAACAGACTCCAAATTTTACAATGCAGGTCGCTGTCCACACAACAAATGTCCTGGGGCACTGGACTTTGACATGCGATGCAGGGATGGAACAGGTTTCTGCTGTGGGGTCAAAGAAATGGACGCAAAAGAAATCAACTGTGGCCGCTACACCCTCCCTATCAAGGTTGTGAGTGAATGTGGCTGCCAAACTTGTGTAGAGCCTAAAGTTCTTGTACGGGGCAGGGTGGTGGCAACAGACAATGATGAACCTCTGCGCTTTGGACACATTTACATTGGGAAGGAACGAATAGGTACTACAGGATATCAGGGTGGCTTCACAATCCAGGTGTCTCCAGAAACACAGCGTTTAGTGGTAAACTTTGTGGACCCTTCTCAGAAGTTCATTGACACAATCAAGGTTTTTATCTTTGACAAGAGAGGAGGTGCAGTCTACCATGACGTCAAAGTGATGAGGAAGCAGGAACCTATTGATATCAATGCTGCAGAAAGCAACACCATTTACCTAGGTGAAATGAAGGATGAGGATCCCATCGGTCAACTGGTCATACCTCCAAACTCTTTCCATAAAAACACAGGGGAAGTGTATGAAGGGACTGTTAAGGCCAGTGTGACATTCCTTGATCCACGCAATATTACAATGGCTGCTGCCGCCCCTGGTGATCTTAACTTTGTCGATGATGAAGGAGACATGCTCCCTCTCAGGACATATGGAATGTTTTCAGTAGATTTCCGAGATGGAGAAAACCAGGAGGTTCTAGGAGCTGGTGCAGTGCAAGTTCTCCTTGATACAGAGCATGTCAAAATGCAGGAGCACATCCCTGCTATGAAACTCTGGTCCCTCAATCCTGACACAGGTATTTGGGAGGAGGAGAGTAACTTTCAGCCAACACAAAGTACCATTGCTGGCACTGGGAGAAACAAACGAGAGGAACGCACATTCTTAATAGGAAATATGGAAATCAGGGAGCGTAGGTTGTTCAATCTTGATGTACCTGAAAATCGCCGCTGCTATGTCAAGGTTAGGGCATACATGAGTGACAAGTTCTTGCCCAACGAGCAACTCGAAGGAGTTGTAATAAACTTGATTAACCTGGAACCTAAACCTGGTTACTCGTCAAATCCGCGAGCCTGGGGTCGCTTTGATAGCGTGATAACAGGACCAAACGGTGCTTGTCTTCCAGCTTTCTGTGATGCTCAGAGGGCTGATGCTTACACAGCTTATGTAACGGCTATAATGGGAGGAGAGGAACTAGAAGCAGCTCCCTCAATGCCAAAAATGAACCCAAACATTATTGGTGTGTCTCAGCCATATTTAGGGAAGTTAGATTACCAGCGTTCAGATCATGAGGACTCAGCACTCAAAAAAACAGCCTTCCGAATAAACCTGGCCAAACCAAACCCTAACAATTTTGATGAAACAAATGGACCCATCTATCCTTTCCAGAGTTTAATTGCATGTGAAAATGCACCTGTTGATGCCAACCACTTTCGTTTTTTCCGTGTTGAAAAAGATAAATATGAATACAATGTGGTACCCTTTCAGGAAAGTGACCTTACATCTTGGACTGGAGACTACCTTTCCTGGTGGCCAAATCCACAAGAGTTCAGAGCTTGCTTCATTAAAGTTAAGATTCATGGAGCTACAGAAATTATGGTAAGGTCAAGAAATCTTGGTGGGACTCATCCTCAAACAAGAGGTCAGTTGTATGGTATTAGAGACATTCGCAGTACTCGAGACTTACACCATCCCAACACCTCTGCTGCTTGTCTTGAATTTAAGTGCAGCGGGATGCTCTTTGATCAAGGTAGTGTAGACAGGTCACTCATTTCTGTGATCCCACAGGCCAACTGCCGTCGTATAGGCATTAACAGTCTCCTGCAAGAGTATCTGATAAAGCATCCCCCTGTTCTTCAGAATAATGAGTCACATGCATTCAATATGTTAGCACCCGTTGATCCCCTTGGACACAATTATGGAATATACACCGTCACGGACCAGAACCCACGCGTTGCCAAAGAGATCGCCATTGGCCGCTGCTTTGATGGAACTTCAGATGGTTTTTCCAGGGAGATGAAGTCAGATTCTGGAGTGGCACTGACGTTCAGCTGCCCTAAAAGAACTGTGAATCGCGAGAGCTTATTCCAACGCTTGCAAACAAATCCAGGCCTAACACTAACACAGATGGCACGGGAGATGAGGGAGTCCCAGGGATTACAAGTCAGAAGAGGGTCAACTCAAATGGTGGCCTACCCCTTTGGCCAACAGGGCAGGAGCCAGAACCGCAGAGCCACGAACACTAACAGAAGGAGACCTGCTTCAAGGACACAACCAAGACAGTAG

Function

symbol description
cilp2 Predicted to be located in extracellular region. Orthologous to human CILP2 (cartilage intermediate layer protein 2).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-436 Predicted to be located in extracellular region. Orthologous to human CILP2 (cartilage intermediate layer protein 2).

Ensembl:

ensembl_id ENSDARG00000013687

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040395 False 3776 mRNA 0.48 9 18469004 18485470
TCONS_00040396 True 3425 mRNA 0.47 6 18477934 18485462

Neighbor

gene id symbol gene type direction distance location
XLOC_020347 yjefn3 coding upstream 4350 18389271 ~ 18464654 (+)
XLOC_020346 gatad2ab coding upstream 81085 18315490 ~ 18387919 (+)
XLOC_020344 NA coding upstream 164716 18243758 ~ 18304288 (+)
XLOC_020345 NA coding upstream 177207 18291474 ~ 18291797 (+)
XLOC_020343 mef2b coding upstream 252516 18187857 ~ 18216488 (+)
XLOC_020349 BX649279.1 coding downstream 12289 18497759 ~ 18498645 (+)
XLOC_020350 si:ch211-212d10.1 coding downstream 44925 18530395 ~ 18537415 (+)
XLOC_020351 NA coding downstream 74873 18560343 ~ 18596258 (+)
XLOC_020352 cbarpb coding downstream 301327 18786797 ~ 18824801 (+)
XLOC_020353 fstl3 coding downstream 399501 18884971 ~ 18897231 (+)
XLOC_020339 BX908731.2 non-coding upstream 644431 17824459 ~ 17824573 (+)
XLOC_020324 NA non-coding upstream 1657643 16810284 ~ 16811361 (+)
XLOC_020322 BX322568.1 non-coding upstream 1829579 16639310 ~ 16639425 (+)
XLOC_020360 BX927243.1 non-coding downstream 751561 19237031 ~ 19238226 (+)
XLOC_020380 BX510913.2 non-coding downstream 1286228 19771698 ~ 19771812 (+)
XLOC_020381 BX510913.3 non-coding downstream 1307649 19793119 ~ 19793233 (+)
XLOC_020382 NA non-coding downstream 1353805 19839275 ~ 19839592 (+)

Expression


Co-expression Network