XLOC_002035 (dre-mir-218b)


Basic Information

Item Value
gene id XLOC_002035
gene name dre-mir-218b
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 17695265 ~ 17695340 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00003944
CAGGACACCATTGTGCTTGATCTAACCATGCAGTTCCCTTTCTGTCCATGGTTGTGCCAAGCACTTTGGAGACTTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083269

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00003944 True 76 miRNA 0.49 1 17695265 17695340

Neighbor

gene id symbol gene type direction distance location
XLOC_002034 drg1 coding upstream 4094 17681074 ~ 17691171 (+)
XLOC_002033 kcnn2 coding upstream 20920 17592273 ~ 17674345 (+)
XLOC_002032 NA coding upstream 107388 17583381 ~ 17587877 (+)
XLOC_002031 NA coding upstream 197493 17459657 ~ 17497772 (+)
XLOC_002030 dre-mir-301c coding upstream 240693 17454490 ~ 17454572 (+)
XLOC_002036 slc20a1b coding downstream 17682 17713022 ~ 17728165 (+)
XLOC_002037 pigo coding downstream 52540 17747880 ~ 17759878 (+)
XLOC_002038 ccl19b coding downstream 81641 17776981 ~ 17780102 (+)
XLOC_002039 phf24 coding downstream 155594 17850934 ~ 17926298 (+)
XLOC_002040 BX927277.1 coding downstream 194749 17890089 ~ 17890203 (+)
XLOC_002029 dre-mir-130c-1 non-coding upstream 241762 17453363 ~ 17453503 (+)
XLOC_002028 NA non-coding upstream 246226 17442234 ~ 17449039 (+)
XLOC_002042 NA non-coding downstream 311783 18007123 ~ 18071506 (+)
XLOC_002043 NA non-coding downstream 545210 18240550 ~ 18282435 (+)
XLOC_002045 AL928714.1 non-coding downstream 1103587 18798927 ~ 18802435 (+)
XLOC_002056 CABZ01059627.3 non-coding downstream 1887949 19583289 ~ 19589733 (+)

Expression


Co-expression Network