G91773 (LOC106577205)


Basic Information

Item Value
gene id G91773
gene name LOC106577205
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 81867455 ~ 81874732 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU101071
CGAAGATCCAAATGATCTTAAACCCCCACCAAATGTGTAGAATGCTGAGGTACAGTACATGGTGAATTGAAAGATGACATGCTTACATTGTGTAGGAGCTCTCTGGCAGTGGTCCTCTCCCTCACACCCACCACCGTAAAAGGCTCAGGCCCAGGGACTCCATGGACGGTGACTCTGTACTGCACAGCAGCCCTACGCTCCTCTGTGCTGAAGAGctgggagacacagacacacagaaaaatCCTGCACACTCTGTAGCTCTCAAGGACAGGAGTAGGAGAAAACCCTGCACTACAGACTCACCCACTATACACTCACTAcacactatagactacagactcaCCCATGATGCAGGCCGTGAACCTGCTTTTCCGCTGTCTTCAGATGTACGGCTGTAGATGAACAGACTGGAGACTGGCAGGACCTCGTTGTGCTGATTCCTCAGCTGCACGTGCCTGTATCCtgCtgtcctgagtgctctgagtGATATGATTCTCTGAGCGGTGGTCTGGGAGCTGTTGTGTTCCACCACAGTAAACCGTAGGAAGGCCAGGTCAGCCATGAGCAGGGGGAGGTGGAAGCTCTGGTTCCATATGGGGTTCAGGGGGTTACGGTGAACGGGTTTGGTGCGGAAGTGACACCCGTCAGCCTGCATCCCCAGGATGTCTACCTCGATGCATGGACTGCCTGCTGTAGTCCCTGGGCATAGA

Function

NR:

description
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101071 True 710 lncRNA 0.53 2 81867455 81874732

Neighbor

gene id symbol gene type direction distance location
fih1 LOC106577208 coding upstream 5560 81852648 ~ 81861895 (+)
LOC110530514 LOC106577205 coding upstream 31964 81824592 ~ 81884237 (+)
scdb LOC106577210 coding upstream 54541 81803814 ~ 81812914 (+)
LOC110532764 NA coding upstream 76484 81787863 ~ 81790971 (+)
LOC110530482 LOC106577211 coding upstream 90454 81775161 ~ 81777001 (+)
LOC110530526 LOC106577204 coding downstream 32184 81906132 ~ 81907399 (+)
LOC110530536 LOC106577203 coding downstream 35386 81910118 ~ 82005198 (+)
LOC110530572 LOC106577202 coding downstream 253887 82128619 ~ 82163498 (+)
LOC110530588 LOC106577200 coding downstream 297344 82172076 ~ 82179077 (+)
LOC110530624 cssa18h10orf11 coding downstream 581567 82456299 ~ 82916411 (+)
G91738 NA non-coding upstream 53291 81813843 ~ 81814164 (+)
G91731 NA non-coding upstream 65671 81801551 ~ 81801784 (+)
G91721 NA non-coding upstream 89278 81777781 ~ 81778177 (+)
G91710 NA non-coding upstream 129751 81737502 ~ 81737704 (+)
G91709 NA non-coding upstream 130924 81736323 ~ 81736531 (+)
G91826 NA non-coding downstream 74630 81949362 ~ 81949566 (+)
G91829 NA non-coding downstream 77674 81952406 ~ 81952619 (+)
G91832 NA non-coding downstream 80622 81955354 ~ 81955569 (+)
G91837 NA non-coding downstream 89591 81964323 ~ 81964678 (+)
G91838 NA non-coding downstream 90121 81964853 ~ 81965227 (+)
G91541 LOC106591086 other upstream 326055 81538331 ~ 81541400 (+)
G91064 NA other upstream 1101300 80765114 ~ 80766155 (+)
acoxl acoxl other upstream 2102096 79720751 ~ 79765359 (+)
G89667 NA other upstream 2317804 79549017 ~ 79549651 (+)
G87159 NA other upstream 4296985 77570015 ~ 77570470 (+)
G91779 NA other downstream 2807 81877539 ~ 81879178 (+)
G92511 NA other downstream 267392 82142124 ~ 82142587 (+)
G92575 trmt13 other downstream 306214 82180946 ~ 82181796 (+)

Expression


Co-expression Network