XLOC_020353 (fstl3)


Basic Information

Item Value
gene id XLOC_020353
gene name fstl3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 18884971 ~ 18897231 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040403
ATGAACGTTTTGGCTGTCCTGCACTGTGTGATACTTATTTCAGTTTGTGAAATACTTGGAGAACATCGAACGAGCGCTGGCATGTGCTGGTTGCAGCAGGGTCCGGAGCACCGCTGTGACATGGTGCTCATGAGGGGTGTGAGCAGGGAAGAGTGCTGTGCTGCTGGCCGTCTGGACACTGCCTGGTCCAATGCTAGTCTGCCCATCAATGAAGTCAGCCTGCTGGGATTCCTGGGAATAGTTTCCTGTAAGCCGTGTAAAGAGAACTGTGAAGGAGTGAACTGTGGCCTTGGAAAGGTGTGTAGAATGAAGTCAGGACGCCCACAGTGCGTTTGCTCTCCAGACTGTTCCAACATCTCCACTAAACACGCAGTGTGTGGGAGCGATGGGAATTCCTACAAAGACGAGTGCGCGCTCCTGATGGCTCGCTGCAAAGGTCATCCTGACCTGGAGATAATGTACCAGGGGGAATGCAAAAAGTCCTGCTCAAATGTGGTATGTCCTGGTACTCATACCTGTGTGACGGACCAGACTAACAGTGCCCACTGTGTCATGTGCCGCACTGCACCTTGTCCGATGCCCATGATCACCGAGCAAACCATCTGCGGCAATGATAACATCACTTACCAAAGTGCTTGCCACCTGCGTAGGGCAACCTGCTTTTTGGGTCGATCCATAGGAGTTCGCCACTATGGACACTGCAGAAGTAATGAAGCAAGTGAGGAAAATTCACTCTTCTGAGGATGTCAAGACAGATCCTCTCCTTGTATATATTATGATGGCACATAAGACGTGAGAGAACCTGTTTGAAACCATATCACAACACGGTCCTCTGTACCAAAGAACCACTAGTATTTTATAGGCATGCAATTCAATACTTAAAGGAAACGTGTGGTTTTTAACAGGAGAATTGAACTGATGAATTGACAGTGTGCATATTGTAAATATACTACAAGCTACTATTTATTGGAGAAAAGTTAGGAAGTCGGTGTTATTTATGTGTTAACACGTTTGAGACACCATATATTCGTACATCAGCTGCCTTTCTCTATGTATTTATTGTGGGTTTTGCTTCAGTTTTCATGTATTTGTCAGAACTGAATAATGTAAACGTGCACGACAGGGTTTCCGTACCTTTGAATCCTCATAATTACTGAACAGAAatgactaaaacattttttttgttttcacaaagaGCTATTTCTtgccaaataaatgtttttttacattacattttatggtatttatattatttttgtactaaatgtattatattattttatgtttttatttaaatgataataaataataattcacatGCTTTGTCAgaaatgattattttaaattatatttccctATTTTTAGTAAGGCCTCGGAAACTCTGAGATAAGCATTGTGTATGCCAGACAGAGTATGCAAATAgaaattgtgttatttatttttatttttttatgtttttttataatttccaAATCTCTTGGGATTGGGATCAAAAACAGCTCTATTTTATtcggtacactctcagaaataaaggtacgtgagtgTCACTGGgttggtaccttttcaaatggtacacatttgtacttaatggGTCCatgttggtacctcaaaagtatatattagtacctaaatattttaaggaaaacacttttgcacttttaattactaatttGTATCCTTgaagtattaatatggacctttacggtacaaatttgtaccttttgaaaaagtaccatctcagtgacagctcttgaacctttatttctgagagtgtaacagAAATGTATGAAGCACAGCTCACTCAAAAATCTATTCAAACCAGTCTGTCATCTGTTTGTCAGCTTGGCAAATTCACAACCAACTTGAACAAGCAACATCTGTTTCAGGAAGTTTATCAAACGAAATTCCAGATTAAAATGAATGATTACAAAATCTCACTGTTTAAAACCAGTCAATCCGCTAAATGTGCTTAAGCAACTTGAACATGAGCAAAATTCAGGAACTTCTTTGGCCTCATACAAAACTTCACGTCTTAAAATGTTTGCCTTTTCAACCGAAATCTGTTTCTGGAACTGTTTTACACCTTCAGAGGAAACTCCAAACTTGTTTCTATTGGAATTAATGGATTTTGAATACAAAAGTCAGAGATCTGTTGGTCAGTGTGGCGAGTTTGTGATAGCAACTTTAACATGAGCAAAAAAATTTTTGGGAAATATTATTGGTCTGATATGAAACTCAGCTTTGCACCCTTCCCTTTGGAGAATTACTGGAGTTTGTCTAAAAACTTTTGACCTTTCAACCAATAATCTGTTTGTCAACATGGCAAATTTGCGTATGTTTTTGAGCTAAAAAAATTATCAGATTCAGACCAATCAATAATCTGTTGGCCAGCAATGCCAAAAAGGGTTTAGTAACCTGATTGAGTCACCTGTGAAGCCCTGTCTACATGAACAGTACATTATTTCTACTTCCGCACAATTTATTCTTGTTGTCcctacacaaattgattaagttaaccttttaacaaatttatgtggattgaacataaaaaaattaagttgtcccaataaaatctcaagatttgtgttttttttttagctcattttaaataagtagtttgaacaagttaaaaaaagattattttgtgTGCAGATAATTATTAAAACCACAAACGCAATATCAGGTGcccaaaactatttttttgaaAGCTCCTACTagagtgaactttttttttttttttaaactcagtaACATTGTGGTTGTGTGGTTAACAAAGATTATTACCTTCATGACGTCTGTGTGCATTCTGTTCATCTTTTGTTTTACGTCAAATTATGCACCAGTATCTTCTTTTGCAGACTGCTGATAAGGTTGTATCACCATCTGCTGGTCTGGATGACAGTGCATCTGTATGTgaatggagattttttttttttaacaaattaaggTCATAcacactgggttccacacaatttctttatttaatcTAAGTGcgctttatttataaactaatttggagaggatcacatgcttttgATTAAGCAAGGTTGGTCCTGCCTCAGCTCCACATATTGTgccaatcagatgaatactgacACATTATAAATAACCATAGTTTTTCACTtcagtcatcttcatcttgaagaattcccccttccacctctacttCTTCCCTTCTTATAgggtggcacggcggcccagtggttttgactgttgcctcacagcaagaacaccaacTCACCGAGCCAGTCTGCATTTCTGTCtaaattttgcatgttctcccagtgctcgcatgggttttccTCGGTTTTCTCTCACCGTCTAAAGATATACATCATAAGTAAATTTACTATTCCAGGAGGGACACCCGCGCTCGAGGATATACTGAGCTTAGAGCTCTcccccaggacagcatgccaaacttactttattatcaatcatcagcttagtATGAACTAAAACACAAATCTATTATCGGGTAataatttttactattttaaattgaaatttaaaaattaagttgcCCCTAAAAAATTAAAGAAccatgttgtttcagctcattttaaataagtagtttgaacaagcagcaaaaatatatttttgagtgtacttgTCGACATGGCCTGCAATGACTGGAATTTGACAGTTTAAAACCAACTAATGATCTGTTCAACATAGCAAATACATGAGACCAACTTGAACATAATCAAAAACTGTTTAAGGAACTTTTTCATCTTAACTTAAAGTTCAAAATTTACAATGCTGATTTAGCTAGCACACATAGTCCTAATTTGAACAATTAATCTACTGAAAAAGTTaatctacataaaaaaaaaatgttggttttGTTAGTCTTTAAACAAAATCTCACCATTTGATTTTGCTCTTGGATGGTAAgtcttctctgatgatgtcaaaaaatatgaagtgtaaaaaaaaaaagatcagttagtcatgacagcatgtttttagttcattgaaacatattaaactaagttaataatgttctaacttaatttaataagttacgcaagctgtttaagtcagtttaacataatattatataacataatatataaaaagttCAATTGACTCATTCAACTTCAAAATTTAAGGCAGTCGGCGCCGgtagcctagtggtactgcgCGTTGACATATAGCACCAGTGTGCTCGtggcgacccgggttcgattcccatCTCGAGGTCATTTGCCAATCCTTTCCCTCACGCTGGTCCcagtgctttcctgtctgaattctctactgtcttatcaaaataaaggtgaaaaacccctaaaaaataattataaaaaaaaaaaattaaggcaaccaagatttttttttttacagtgtctgctcaaaattttcagttggaaataatgtcatcaaataaaaaaaaagtcaaagattTTCTACCTTGCATGACATTGCAGATATCCCATGTTCCTAATAAATTTGATtgattttgctaaaaaaaatttttttaaaaagtgacaagAATAGTTAATAACCAGAACAACTGCAACTTCACCATaggtacaaaaaaaaagtcagcaaaaTCCATGTGGACGAACATTTCAAATTCTTATGGACATGGGAGACTACTTACTCATTGAGATGAAGTGTTGTGAGTGTACTGTTTGTATTCAGAGGGATTACTCAGCCAAAACAGCTACGCTTCCAGGCCAACATTGCGCTGACATGAAGACCAAACAGAGCCACCCACCGAGCAATGAAATTACCAGCTACAGTCTGATGGCAGCGGTTTTTATGAGAACGCTGGGACAGTCAAAGAATGTACAGTACACTCTACCGATTTAATGGTTTTCACATTGTCGGgttgtgtttttttcattttgtgtgtACAAGTTTTATGGTTACTTGACCTTGTTGTATACTTAAATGGTCATACAAAGGATTTTTGTGTCTGAGAGTTTGTTTGATTCCAGGTCAATTAGGGTATTAAGTAAAAACGTGGTTTGGTTATATGTctaaaccatcattgtacaagtTTCTTGCGAATGTAACCTTTCTTTTCTTTAACCTTCCTGTCAATACAGACCCTTTGCAGCATCTGAAGTATGCATACTGTTTATTCAATTGcatattattgtattgtttacttgcatttttttaattaaaacacaaaTCTAATAATT
>TCONS_00040404
CTGGCATGTGCTGGTTGCAGCAGGGTCCGGAGCACCGCTGTGACATGGTGCTCATGAGGGGTGTGAGCAGGGAAGAGTGCTGTGCTGCTGGCCGTCTGGACACTGCCTGGTCCAATGCTAGTCTGCCCATCAATGAAGTCAGCCTGCTGGGATTCCTGGGAATAGTTTCCTGTAAGCCGTGTAAAGAGAACTGTGAAGGAGTGAACTGTGGCCTTGGAAAGGTGTGTAGAATGAAGTCAGGACGCCCACAGTGCGTTTGCTCTCCAGACTGTTCCAACATCTCCACTAAACACGCAGTGTGTGGGAGCGATGGGAATTCCTACAAAGACGAGTGCGCGCTCCTGATGGCTCGCTGCAAAGGTCATCCTGACCTGGAGATAATGTACCAGGGGGAATGCAAAAAGTCCTGCTCAAATGTGGTATGTCCTGGTACTCATACCTGTGTGACGGACCAGACTAACAGTGCCCACTGTGTCATGTGCCGCACTGCACCTTGTCCGATGCCCATGATCACCGAGCAAACCATCTGCGGCAATGATAACATCACTTACCAAAGTGCTTGCCACCTGCGTAGGGCAACCTGCTTTTTGGGTCGATCCATAGGAGTTCGCCACTATGGACACTGCAGAA

Function

symbol description
fstl3 Predicted to enable activin binding activity. Predicted to be involved in cell differentiation; negative regulation of activin receptor signaling pathway; and regulation of BMP signaling pathway. Predicted to be active in extracellular space. Orthologous to human FSTL3 (follistatin like 3).

GO:

id name namespace
GO:0030154 cell differentiation biological_process
GO:0032926 negative regulation of activin receptor signaling pathway biological_process
GO:0007275 multicellular organism development biological_process
GO:0030510 regulation of BMP signaling pathway biological_process
GO:0005615 extracellular space cellular_component
GO:0048185 activin binding molecular_function

KEGG:

id description
ko01002 Peptidases and inhibitors

ZFIN:

id description
ZDB-GENE-050913-111 Predicted to enable activin binding activity. Predicted to be involved in cell differentiation; negative regulation of activin receptor signaling pathway; and regulation of BMP signaling pathway. Predicted to be active in extracellular space. Orthologous to human FSTL3 (follistatin like 3).

Ensembl:

ensembl_id ENSDARG00000025670

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040403 False 5159 mRNA 0.36 5 18884971 18897231
TCONS_00040404 True 630 mRNA 0.54 3 18886209 18892696

Neighbor

gene id symbol gene type direction distance location
XLOC_020352 cbarpb coding upstream 60170 18786797 ~ 18824801 (+)
XLOC_020351 NA coding upstream 288713 18560343 ~ 18596258 (+)
XLOC_020350 si:ch211-212d10.1 coding upstream 347556 18530395 ~ 18537415 (+)
XLOC_020349 BX649279.1 coding upstream 386326 18497759 ~ 18498645 (+)
XLOC_020348 cilp2 coding upstream 399501 18469004 ~ 18485470 (+)
XLOC_020354 bsg coding downstream 32181 18929412 ~ 18946453 (+)
XLOC_020355 hcn2b coding downstream 53865 18951096 ~ 19007968 (+)
XLOC_020356 fgf22 coding downstream 214213 19111444 ~ 19156332 (+)
XLOC_020357 si:dkey-21e2.3 coding downstream 278420 19175651 ~ 19183506 (+)
XLOC_020358 si:dkey-21e2.8 coding downstream 291578 19188809 ~ 19268280 (+)
XLOC_020344 NA non-coding upstream 580683 18243758 ~ 18304288 (+)
XLOC_020345 NA non-coding upstream 593174 18291474 ~ 18291797 (+)
XLOC_020339 BX908731.2 non-coding upstream 1060398 17824459 ~ 17824573 (+)
XLOC_020324 NA non-coding upstream 2073610 16810284 ~ 16811361 (+)
XLOC_020360 BX927243.1 non-coding downstream 339800 19237031 ~ 19238226 (+)
XLOC_020380 BX510913.2 non-coding downstream 874467 19771698 ~ 19771812 (+)
XLOC_020381 BX510913.3 non-coding downstream 895888 19793119 ~ 19793233 (+)
XLOC_020382 NA non-coding downstream 942044 19839275 ~ 19839592 (+)
XLOC_020383 NA non-coding downstream 1114565 20011796 ~ 20050276 (+)

Expression


Co-expression Network