G92582 (LOC106608577)


Basic Information

Item Value
gene id G92582
gene name LOC106608577
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82186356 ~ 82186571 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU101996
TGACGCTTCTCCAGCTCGTATAGTTGTTTTTCCAGGGCCTCTCTCATTCCTTTACCACAGTCCAGTTCAATTGTCTTCCCCTGCAGGTGCCTTCTATTCTCCTGGATCTCCTGCTGGGTTGCCTTCAACGCCTCTCTGTTACTTTCTGCCGCTTTGGTTAACTTTGCGAACTGGACACGGAAGCCCTCCTCGGCTTGCTGAAAGTCGGAGGTGGCG

Function

NR:

description
neurofilament medium polypeptide-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101996 True 216 lncRNA 0.53 1 82186356 82186571

Neighbor

gene id symbol gene type direction distance location
LOC110530588 LOC106577200 coding upstream 7279 82172076 ~ 82179077 (+)
LOC110530572 LOC106577202 coding upstream 37507 82128619 ~ 82163498 (+)
LOC110530536 LOC106577203 coding upstream 182703 81910118 ~ 82005198 (+)
LOC110530526 LOC106577204 coding upstream 278957 81906132 ~ 81907399 (+)
fih1 LOC106577208 coding upstream 324461 81852648 ~ 81861895 (+)
LOC110530624 cssa18h10orf11 coding downstream 269728 82456299 ~ 82916411 (+)
LOC110530670 NA coding downstream 1221080 83407651 ~ 83442131 (+)
LOC110530741 LOC106577189 coding downstream 1265677 83452248 ~ 83484011 (+)
LOC110530763 LOC106577187 coding downstream 1324546 83511117 ~ 83667671 (+)
LOC110530841 LOC106613168 coding downstream 1535288 83721859 ~ 83798056 (+)
G92524 NA non-coding upstream 22465 82163573 ~ 82163891 (+)
G92523 NA non-coding upstream 24684 82160032 ~ 82161672 (+)
G92498 NA non-coding upstream 63350 82122726 ~ 82123006 (+)
G92494 NA non-coding upstream 69077 82116836 ~ 82117279 (+)
G92584 NA non-coding downstream 1669 82188240 ~ 82189878 (+)
G92609 NA non-coding downstream 118790 82305361 ~ 82305574 (+)
G92621 NA non-coding downstream 136104 82322675 ~ 82322884 (+)
G92671 NA non-coding downstream 136920 82323491 ~ 82323707 (+)
G92693 NA non-coding downstream 153159 82339730 ~ 82339967 (+)
G92575 trmt13 other upstream 4560 82180946 ~ 82181796 (+)
G92511 NA other upstream 43769 82142124 ~ 82142587 (+)
G91779 NA other upstream 307178 81877539 ~ 81879178 (+)
G93204 NA other downstream 901960 83088531 ~ 83089932 (+)
G93362 NA other downstream 1146695 83333266 ~ 83333576 (+)
G94463 NA other downstream 1858740 84045311 ~ 84048149 (+)

Expression


Co-expression Network