G92677



Basic Information


Item Value
gene id G92677
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82330613 ~ 82330927 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU102101
gatacctcctagccgttgagttagcaacagcagatgcaacgagggttaggaaggaacagacagagtatcccgtctatcacccaatgacgttactacaacgtatgcaattgacaaccagagacattattcaaaggactcggtttggcaacacggccttccatctaccaccaacctaccgaagcgcagctcagagtaaatatttattgcattttcattttccaaatgggcagtaatttagaatgcataagatactgtatttacgatagcacagcttcaccCTTTGTTCCTgtcttcctgctctttcactcaacccag

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU102101 True 315 lncRNA 0.44 1 82330613 82330927

Neighbor


gene id symbol gene type direction distance location
LOC110532782 LOC106577197 coding downstream 28746 82291777 ~ 82301867 (-)
LOC110530601 LOC106577224 coding downstream 42066 82275069 ~ 82288547 (-)
LOC110532773 LOC106600083 coding downstream 64595 82258046 ~ 82266018 (-)
LOC118966722 LOC106600083 coding downstream 84981 82232580 ~ 82245632 (-)
LOC118966721 LOC106577224 coding downstream 111730 82210502 ~ 82218883 (-)
LOC110530617 zn503 coding upstream 108215 82439142 ~ 82442325 (-)
LOC100301648 LOC106577193 coding upstream 618682 82949609 ~ 83267163 (-)
LOC110530648 LOC106577192 coding upstream 941602 83272529 ~ 83374623 (-)
LOC110530724 anx11 coding upstream 1056070 83386983 ~ 83409300 (-)
LOC110532793 lox5 coding upstream 1345137 83676064 ~ 83701456 (-)
G92642 NA non-coding downstream 7211 82322905 ~ 82323402 (-)
G92669 NA non-coding downstream 16062 82314323 ~ 82314551 (-)
G92661 NA non-coding downstream 28495 82301902 ~ 82302118 (-)
G92633 NA non-coding downstream 39093 82246850 ~ 82291520 (-)
G92689 NA non-coding upstream 6410 82337337 ~ 82337579 (-)
G92692 NA non-coding upstream 8082 82339009 ~ 82339245 (-)
G92737 NA non-coding upstream 38057 82368984 ~ 82369229 (-)
G92740 NA non-coding upstream 40451 82371378 ~ 82371655 (-)
G92746 NA non-coding upstream 44777 82375704 ~ 82376388 (-)
G92566 NA other downstream 168870 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 713289 81607478 ~ 81629726 (-)
LOC110532756 LOC106577174 other downstream 1149150 81175845 ~ 81449471 (-)
G91947 NA other downstream 1294475 81035575 ~ 81036138 (-)
G94201 NA other upstream 1153129 83484056 ~ 83485937 (-)
G94613 NA other upstream 1470405 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 1827896 84157529 ~ 84256949 (-)
G94821 NA other upstream 1872560 84203487 ~ 84204464 (-)

Expression



Co-expression Network