XLOC_020357 (si:dkey-21e2.3)


Basic Information

Item Value
gene id XLOC_020357
gene name si:dkey-21e2.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19175651 ~ 19183506 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040413
GTCTTCACCATGACCATGGTCATCATCTCTCTGCTCCTGCTGGTTTCTCTGCCGCCACGGTTGACTTTCACTGTGAACGGCAATGAAGCAACACCTCATTCCAGACCTTACATGGTTTCTGTTCAGTATAAAGGGCATCATATCTGTGGTGGATTCCTCATTAATGAAGCGTTTGTGTTGACCGCTGCACATTGCAGAACCAACACTACTCTATATTTGACAATCATTGTTGGTGCACATAACCTAAAAAATATGAGCCAAGGAGCCGAACGGATCGGAGTGGAGTCTTATTACAAGCATCTGGATTATTATGATAGACCAAGATATGTAAATGACATCATGCTGTTAaagCTAAAGAAAAGGATCACAAGAAGCCAAACTGTAAGTTGGATCTCCATACCAAAAGAAAATGGAGACATCAATAAAGATCCGGTTTGCAGGGTTGCAGGTTGGGGAAGTTCTGTTTTTAATGGAACGCCAAGTCCAGTCCTCATGGAAGCAAATGTGAAGATCATGAACAACGCAAAGTGTAAAGAGAGATGGCAATCAGACTTCTTACCCTCACAGATGATGTGTGTATACGGCAATGGAGGAAGCTGCAgtGGGGATTCAGGAGGCCCTTTGGTTTGTGGAGACACTGCTGTTGGTATCGCATCTTTTGTAAAGACTGGTCTCTGCAATTCACCTCAATATCCTAATGTGTATACTAACATTTCAGCATTTCTTCCGTGGATCAACAATATAATTAAAAGGGATATTTGACTGC

Function

symbol description
si:dkey-21e2.3 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050208-618 Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis.

Ensembl:

ensembl_id ENSDARG00000092814

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040413 True 766 mRNA 0.42 5 19175651 19183506

Neighbor

gene id symbol gene type direction distance location
XLOC_020356 fgf22 coding upstream 19319 19111444 ~ 19156332 (+)
XLOC_020355 hcn2b coding upstream 167683 18951096 ~ 19007968 (+)
XLOC_020354 bsg coding upstream 229198 18929412 ~ 18946453 (+)
XLOC_020353 fstl3 coding upstream 278420 18884971 ~ 18897231 (+)
XLOC_020352 cbarpb coding upstream 350850 18786797 ~ 18824801 (+)
XLOC_020358 si:dkey-21e2.8 coding downstream 5303 19188809 ~ 19268280 (+)
XLOC_020359 si:dkey-21e2.7 coding downstream 35227 19218733 ~ 19233919 (+)
XLOC_020360 BX927243.1 coding downstream 53525 19237031 ~ 19238226 (+)
XLOC_020361 si:dkey-21e2.10 coding downstream 63749 19247255 ~ 19250734 (+)
XLOC_020362 si:dkey-78l4.5 coding downstream 80675 19264181 ~ 19428807 (+)
XLOC_020351 NA non-coding upstream 579393 18560343 ~ 18596258 (+)
XLOC_020344 NA non-coding upstream 871363 18243758 ~ 18304288 (+)
XLOC_020345 NA non-coding upstream 883854 18291474 ~ 18291797 (+)
XLOC_020339 BX908731.2 non-coding upstream 1351078 17824459 ~ 17824573 (+)
XLOC_020324 NA non-coding upstream 2364290 16810284 ~ 16811361 (+)
XLOC_020380 BX510913.2 non-coding downstream 588192 19771698 ~ 19771812 (+)
XLOC_020381 BX510913.3 non-coding downstream 609613 19793119 ~ 19793233 (+)
XLOC_020382 NA non-coding downstream 655769 19839275 ~ 19839592 (+)
XLOC_020383 NA non-coding downstream 828290 20011796 ~ 20050276 (+)

Expression


Co-expression Network