G93904


Basic Information

Item Value
gene id G93904
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048565.1
NCBI id CM023219.2
chromosome length 95772356
location 82999503 ~ 83001499 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU103508
gtcacatagggtggcacacaattggcccattcTATCTAATGGAGTTACAGGCCTACTCAGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGTCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTATTGGAGTTACAGGCCTACTCAGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttggttatagtcagactatcacattctacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAggtctactcaggctggttatagtcaGACTATCACATTCTACCTAAaggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTATTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGtgtactcaggctggttatagtcaGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttGGTTATagtctactcaggctggttatagtcaGACTATCACATTCTACCTAAaggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTttaggcctactcaggctggttatagtcaGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttggttatagtcagactatcacattctacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTAGCTAATGGAGTTACAggtctactcaggctggttatagtcaGACTATCACATTCTACCTAA
>TU103510
gtcacatagggtggcacacaattggcccattcTATCTAATGGAGTTACAGGCCTACTCAGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGTCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTATTGGAGTTACAGGCCTACTCAGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTATTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttggttatagtcagactatcacattctacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAggtctactcaggctggttatagtcaGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttGGTTATagtctactcaggctggttatagtcaGACTATCACATTCTACCTAAaggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTttaggcctactcaggctggttatagtcaGACTATCACATTCTACCTAATGGAGTTACTGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTACCTAATGGAGTTACAGGCCTACTCAGGTTGGTTATAGTCAGACTATCACATTCTacctaatggagttataggcctactcaggttggttatagtcagactatcacattctacctaatggagttataggcctactcaggttGGTTATAGTCAGACTATCACATTCTAGCTAATGGAGTTACAggtctactcaggctggttatagtcaGACTATCACATTCTACCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103508 False 1371 lncRNA 0.41 2 82999503 83001499
TU103510 True 1096 lncRNA 0.41 3 82999503 83001499

Neighbor

gene id symbol gene type direction distance location
LOC110530617 zn503 coding downstream 557178 82439142 ~ 82442325 (-)
LOC110532782 LOC106577197 coding downstream 697636 82291777 ~ 82301867 (-)
LOC110530601 LOC106577224 coding downstream 710956 82275069 ~ 82288547 (-)
LOC110532773 LOC106600083 coding downstream 733485 82258046 ~ 82266018 (-)
LOC118966722 LOC106600083 coding downstream 753871 82232580 ~ 82245632 (-)
LOC110530648 LOC106577192 coding upstream 271030 83272529 ~ 83374623 (-)
LOC110530724 anx11 coding upstream 385498 83386983 ~ 83409300 (-)
LOC110532793 lox5 coding upstream 674565 83676064 ~ 83701456 (-)
LOC110530770 slc25a16 coding upstream 711853 83713352 ~ 83721914 (-)
LOC110530866 nfu1 coding upstream 825450 83814162 ~ 83851846 (-)
G93836 NA non-coding downstream 130934 82865695 ~ 82868569 (-)
G93823 NA non-coding downstream 169375 82829279 ~ 82830128 (-)
G93761 NA non-coding downstream 288124 82711054 ~ 82711379 (-)
G93710 NA non-coding downstream 305055 82631640 ~ 82694448 (-)
G93723 NA non-coding downstream 350749 82648068 ~ 82648754 (-)
G93926 NA non-coding upstream 53207 83054706 ~ 83058742 (-)
G93943 NA non-coding upstream 77338 83078837 ~ 83079268 (-)
G94001 NA non-coding upstream 158071 83159570 ~ 83162155 (-)
G94029 NA non-coding upstream 213082 83214581 ~ 83230512 (-)
G94074 NA non-coding upstream 269510 83271009 ~ 83271227 (-)
LOC100301648 LOC106577193 other downstream 38181 82949609 ~ 83267163 (-)
G92566 NA other downstream 837760 82160407 ~ 82161743 (-)
LOC110530475 eif4ebp2 other downstream 1382179 81607478 ~ 81629726 (-)
LOC110532756 LOC106577174 other downstream 1818040 81175845 ~ 81449471 (-)
G94201 NA other upstream 482557 83484056 ~ 83485937 (-)
G94613 NA other upstream 799833 83801332 ~ 83802471 (-)
LOC110531033 LOC106577242 other upstream 1157324 84157529 ~ 84256949 (-)
G94821 NA other upstream 1201988 84203487 ~ 84204464 (-)
LOC110532813 LOC106613040 other upstream 1290261 84291760 ~ 84331700 (-)

Expression


Co-expression Network