XLOC_020360 (BX927243.1)


Basic Information

Item Value
gene id XLOC_020360
gene name BX927243.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 19237031 ~ 19238226 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040420
CACTGATAGTCTTCATcatgaccatcatcatcatctctgtgCTCCTGCTGGTTTCTCTGGTGCCACACCTGACCTTCACTGCTCATGTGGGTATAGTGGACGGCACTAAAGAAAAAACTCACTCCAGACCTTACATGGTATCTATTCAATATTATGGGCTGCATATCTGTGGTGGATCTCTCATTACTGAAGAGTTTGTCTTGACCGCTGCACATTGCTAGAAGAAATGTGACATCTTGATGGTTGTGATTGGTGCCCATGATTtgcgtaaaaaaacaacaacgagtAGCAACTCATTTAAAGTGACATGCTATATCCCGCATTCAGGCTATAATTCTAATACTTTTGAGAATGACATCATGCTTTTGAAGttaaaaaaaagtcagactAAGCAACAATGTTGGACTGACATCACTATCAAAATATGGAGAAGATGTTAAAGCAGATACTCTGTAGTGTCGGTGGCTGGGGAACATTGTGGATGAATGGCCCAGTGCCTAATCGTCTAAGAGAGGCAGAGACAATTCTAGTGAATGATGCAGAGTGTAAACGCAGATGGAAATTTTCTTACAAGGCCTCAAAGATGATCTGTGTTTATGGTCATGGTGGAACCTGCATTGGGATTTAGGAGGTCCTTTGGTTTGTAAAAACACTGCTGTCGGAGTCACATCTTACGGTGACCCTTATCTTTGTTATTCACGTCTGCTTCCTGAAGTGTATACTAGGATTTCAGCATATCTACCGTGGATC

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000095619

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040420 True 750 unprocessed_pseudogene 0.42 5 19237031 19238226

Neighbor

gene id symbol gene type direction distance location
XLOC_020359 si:dkey-21e2.7 coding upstream 3112 19218733 ~ 19233919 (+)
XLOC_020357 si:dkey-21e2.3 coding upstream 53525 19175651 ~ 19183506 (+)
XLOC_020356 fgf22 coding upstream 80699 19111444 ~ 19156332 (+)
XLOC_020355 hcn2b coding upstream 229063 18951096 ~ 19007968 (+)
XLOC_020354 bsg coding upstream 290578 18929412 ~ 18946453 (+)
XLOC_020361 si:dkey-21e2.10 coding downstream 9029 19247255 ~ 19250734 (+)
XLOC_020362 si:dkey-78l4.5 coding downstream 25955 19264181 ~ 19428807 (+)
XLOC_020363 si:dkey-21e2.13 coding downstream 39135 19277361 ~ 19279253 (+)
XLOC_020364 si:dkey-21e2.14 coding downstream 45752 19283978 ~ 19285300 (+)
XLOC_020365 si:dkey-21e2.15 coding downstream 51744 19289970 ~ 19291261 (+)
XLOC_020351 NA non-coding upstream 640773 18560343 ~ 18596258 (+)
XLOC_020344 NA non-coding upstream 932743 18243758 ~ 18304288 (+)
XLOC_020345 NA non-coding upstream 945234 18291474 ~ 18291797 (+)
XLOC_020339 BX908731.2 non-coding upstream 1412458 17824459 ~ 17824573 (+)
XLOC_020324 NA non-coding upstream 2425670 16810284 ~ 16811361 (+)
XLOC_020380 BX510913.2 non-coding downstream 533472 19771698 ~ 19771812 (+)
XLOC_020381 BX510913.3 non-coding downstream 554893 19793119 ~ 19793233 (+)
XLOC_020382 NA non-coding downstream 601049 19839275 ~ 19839592 (+)
XLOC_020383 NA non-coding downstream 773570 20011796 ~ 20050276 (+)
XLOC_020385 BX005203.1 non-coding downstream 901299 20139525 ~ 20139592 (+)

Expression


Co-expression Network